Top 10 genes with highest correlation to Rv1513/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0404/fadD30 | (cc=0.607) | info on Rv0404/fadD30 |
Rv0913c/- | (cc=0.5375) | info on Rv0913c/- |
Rv3504/fadE26 | (cc=0.4764) | info on Rv3504/fadE26 |
Rv0477/- | (cc=0.4679) | info on Rv0477/- |
Rv2892c/PPE45 | (cc=0.4592) | info on Rv2892c/PPE45 |
Rv1564c/treX | (cc=0.4578) | info on Rv1564c/treX |
Rv0045c/- | (cc=0.4543) | info on Rv0045c/- |
Rv3218/- | (cc=0.45) | info on Rv3218/- |
Rv2683/- | (cc=0.4426) | info on Rv2683/- |
Rv3378c/- | (cc=0.4367) | info on Rv3378c/- |
Correlation of Rv1513/- with Rv0477/-
Normalized LFCs for Rv1513/-:
(description and provenance of datasets)
Rv1513/- | Rv0477/- | |
Fe_supp_jason_reseq | 1.725 | 0.098 |
low_pH_jason_reseq | -0.539 | -1.051 |
NO_jason_reseq | 1.62 | -0.512 |
B6_jason_reseq | 0.052 | 0.415 |
MHCII_jason_reseq | -0.72 | 0.42 |
Isoniazid02 | -0.39 | -0.506 |
Rifampicin4 | -0.726 | -0.073 |
Ethambutol3 | -0.326 | -0.427 |
Meropenem3 | -0.531 | -0.14 |
Vancomycin16 | -0.072 | -0.554 |
Rv2680_day32 | 0.881 | -0.178 |
H37Rv_KO_MarP | 1.051 | 0.302 |
hypoxia_3wks | 1.061 | 0.267 |
hypoxia_6wks | -0.731 | -0.125 |
glycerol | -0.992 | -0.471 |
cholesterol | -0.568 | 0.363 |
AJ | 0.417 | -0.195 |
Bibs02 | 0.694 | -0.162 |
Bibs02c | -1.808 | 0.841 |
BL6 | -1.52 | -0.034 |
BL6a | 1.083 | 0.647 |
BXD01 | 0.9 | 0.627 |
BXD010 | 0.041 | 0.095 |
BXD011 | 1.169 | 0.711 |
BXD03 | 0.74 | -0.379 |
BXD04 | 0.993 | 0.398 |
BXD05 | 1.324 | 0.071 |
BXD06 | 0.9 | 0.456 |
BXD07 | 1.112 | 0.236 |
BXD08 | 1.006 | 0.474 |
BXD09 | 0.822 | 0.305 |
CAST | 1.26 | 0.035 |
CCcont | -0.988 | -0.677 |
DS01 | -0.419 | 0.236 |
DS02 | 0.449 | 0.383 |
DS04 | -1.677 | 0.856 |
DS0c | -0.652 | 0.426 |
GP01 | -0.138 | 1.27 |
GP02 | 1.734 | 1.634 |
GP0c | -0.86 | 0.372 |
NOD | -1.351 | -0.802 |
NZO | 0.845 | 0.993 |
PWK | -1.695 | 0.577 |
H37Rv_KO_CtpC | -1.53 | 0.751 |
H37Rv_KO_CtpD | 1.586 | 0.718 |
H37Rv_KO_Rv1272 | 0.877 | -0.634 |
H37Rv_KO_SugABC | -0.933 | 0.701 |
H37Rv_KO_MbtN | -0.183 | 1.493 |
Trans05 | 1.088 | 0.698 |
macrophage_unactivated | -1.474 | -0.347 |
IL1 | -1.622 | -0.193 |
Rapamycin | -1.197 | -0.479 |
Tcell | -0.189 | -0.345 |
GMCSF | -0.367 | 0.33 |
IFNab | 0.333 | 0.278 |
IFNg | -2.106 | 0.102 |
IFNg_GMCSF1 | -1.549 | 0.236 |
Rv1432_day32 | 0.0 | 0.275 |
Rv1565c_day32 | -1.82 | -0.742 |
secA2_input | -1.398 | 0.358 |
delta_Rv3594 | -1.741 | -0.107 |
delta_Rv3717 | -1.601 | -0.133 |
delta_Rv3811 | -2.787 | -0.671 |
delta_Rv0954 | -0.7 | -0.721 |
PonA1 | -3.817 | -1.163 |
EccD1_KO | -1.171 | 0.082 |
EspI_KO | -0.776 | 0.274 |
PE35_KO | 0.0 | -0.866 |
PPE68_KO | -0.374 | -0.49 |
glycerol2 | -0.388 | -0.017 |
lignocerate | -1.431 | -0.809 |
oleate | 0.352 | 0.768 |
phosphatidylcholine | -0.506 | -0.51 |
acetate | -1.553 | -1.049 |
glucAc | -4.028 | -2.238 |
Rv0950ko | 1.885 | 1.155 |
Rv1096ko | 0.682 | 0.166 |
Rv3684ko | 2.047 | 0.868 |
delta_otsA_trehalose | 5.088 | 0.487 |