Top 10 genes with highest correlation to Rv1498A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2519/PE26 | (cc=0.5856) | info on Rv2519/PE26 |
| Rv2548/vapC19 | (cc=0.544) | info on Rv2548/vapC19 |
| Rv1217c/- | (cc=0.5413) | info on Rv1217c/- |
| Rv1729c/- | (cc=0.5307) | info on Rv1729c/- |
| Rv0505c/serB1 | (cc=0.5054) | info on Rv0505c/serB1 |
| Rv1548c/PPE21 | (cc=0.4837) | info on Rv1548c/PPE21 |
| Rv1583c/- | (cc=0.4738) | info on Rv1583c/- |
| Rv1507c/- | (cc=0.4673) | info on Rv1507c/- |
| Rv2735c/- | (cc=0.4619) | info on Rv2735c/- |
| Rv2818c/- | (cc=0.4595) | info on Rv2818c/- |
Correlation of Rv1498A/- with Rv2548/vapC19
Normalized LFCs for Rv1498A/-:
(description and provenance of datasets)
| Rv1498A/- | Rv2548/vapC19 | |
| Fe_supp_jason_reseq | 0.684 | 0.63 |
| low_pH_jason_reseq | 0.0 | -0.087 |
| NO_jason_reseq | 0.48 | -1.124 |
| B6_jason_reseq | -1.941 | -3.129 |
| MHCII_jason_reseq | -1.531 | -1.396 |
| Isoniazid02 | 0.15 | 0.499 |
| Rifampicin4 | 0.474 | -0.403 |
| Ethambutol3 | 0.409 | 0.621 |
| Meropenem3 | 0.21 | 0.034 |
| Vancomycin16 | 0.515 | 0.334 |
| Rv2680_day32 | 0.973 | 0.017 |
| H37Rv_KO_MarP | -0.418 | -0.22 |
| hypoxia_3wks | -0.299 | 0.0 |
| hypoxia_6wks | 0.015 | 0.0 |
| glycerol | -0.159 | -0.961 |
| cholesterol | -0.348 | -0.811 |
| AJ | -1.805 | -0.677 |
| Bibs02 | -0.91 | 2.277 |
| Bibs02c | -0.133 | 0.643 |
| BL6 | 0.571 | 0.661 |
| BL6a | 0.56 | 2.307 |
| BXD01 | -0.669 | 1.936 |
| BXD010 | 0.357 | 1.95 |
| BXD011 | 0.505 | 2.089 |
| BXD03 | 0.198 | 1.217 |
| BXD04 | -0.866 | 1.65 |
| BXD05 | 0.76 | 2.049 |
| BXD06 | -0.085 | 1.943 |
| BXD07 | 0.513 | 2.508 |
| BXD08 | 0.116 | 2.196 |
| BXD09 | 0.448 | 2.123 |
| CAST | -0.472 | -0.752 |
| CCcont | -0.341 | 1.764 |
| DS01 | -0.351 | 0.388 |
| DS02 | 0.101 | 0.54 |
| DS04 | -0.753 | 2.02 |
| DS0c | -2.861 | -1.411 |
| GP01 | 0.436 | 1.199 |
| GP02 | -0.236 | -0.466 |
| GP0c | 0.528 | -0.425 |
| NOD | -1.681 | -0.895 |
| NZO | 0.139 | -1.394 |
| PWK | -0.709 | -0.324 |
| H37Rv_KO_CtpC | 1.027 | 1.218 |
| H37Rv_KO_CtpD | 2.402 | 2.7 |
| H37Rv_KO_Rv1272 | 0.64 | 0.406 |
| H37Rv_KO_SugABC | 0.644 | 0.73 |
| H37Rv_KO_MbtN | -0.596 | 0.076 |
| Trans05 | 1.133 | 1.696 |
| macrophage_unactivated | -0.83 | 0.953 |
| IL1 | -0.323 | 0.575 |
| Rapamycin | -0.319 | -0.654 |
| Tcell | -1.401 | 0.43 |
| GMCSF | -0.227 | 0.349 |
| IFNab | -0.78 | -0.06 |
| IFNg | -0.433 | -0.569 |
| IFNg_GMCSF1 | -1.775 | -0.223 |
| Rv1432_day32 | 0.374 | 0.516 |
| Rv1565c_day32 | 1.031 | 1.193 |
| secA2_input | -2.661 | -1.368 |
| delta_Rv3594 | -0.28 | 0.376 |
| delta_Rv3717 | -0.634 | 0.92 |
| delta_Rv3811 | 0.326 | 0.526 |
| delta_Rv0954 | -0.315 | -0.634 |
| PonA1 | -1.297 | -1.604 |
| EccD1_KO | -1.342 | -0.622 |
| EspI_KO | -1.03 | -0.761 |
| PE35_KO | 0.613 | -0.303 |
| PPE68_KO | -0.787 | -0.218 |
| glycerol2 | -1.956 | 0.388 |
| lignocerate | -0.912 | 0.218 |
| oleate | -1.062 | 0.302 |
| phosphatidylcholine | -0.825 | 0.515 |
| acetate | 0.239 | 0.148 |
| glucAc | -0.19 | -0.355 |
| Rv0950ko | -0.745 | -1.447 |
| Rv1096ko | -1.535 | -1.176 |
| Rv3684ko | -2.161 | -1.402 |
| delta_otsA_trehalose | -0.792 | 0.134 |