Top 10 genes with highest correlation to Rv1498A/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2519/PE26 | (cc=0.5856) | info on Rv2519/PE26 |
| Rv2548/vapC19 | (cc=0.544) | info on Rv2548/vapC19 |
| Rv1217c/- | (cc=0.5413) | info on Rv1217c/- |
| Rv1729c/- | (cc=0.5307) | info on Rv1729c/- |
| Rv0505c/serB1 | (cc=0.5054) | info on Rv0505c/serB1 |
| Rv1548c/PPE21 | (cc=0.4837) | info on Rv1548c/PPE21 |
| Rv1583c/- | (cc=0.4738) | info on Rv1583c/- |
| Rv1507c/- | (cc=0.4673) | info on Rv1507c/- |
| Rv2735c/- | (cc=0.4619) | info on Rv2735c/- |
| Rv2818c/- | (cc=0.4595) | info on Rv2818c/- |
Correlation of Rv1498A/- with Rv1548c/PPE21
Normalized LFCs for Rv1498A/-:
(description and provenance of datasets)
| Rv1498A/- | Rv1548c/PPE21 | |
| Fe_supp_jason_reseq | 0.684 | 0.44 |
| low_pH_jason_reseq | 0.0 | -0.494 |
| NO_jason_reseq | 0.48 | 0.399 |
| B6_jason_reseq | -1.941 | -0.968 |
| MHCII_jason_reseq | -1.531 | -1.76 |
| Isoniazid02 | 0.15 | 0.049 |
| Rifampicin4 | 0.474 | 0.439 |
| Ethambutol3 | 0.409 | -0.533 |
| Meropenem3 | 0.21 | -0.073 |
| Vancomycin16 | 0.515 | 0.0 |
| Rv2680_day32 | 0.973 | -0.368 |
| H37Rv_KO_MarP | -0.418 | 0.268 |
| hypoxia_3wks | -0.299 | 0.243 |
| hypoxia_6wks | 0.015 | -0.177 |
| glycerol | -0.159 | 0.143 |
| cholesterol | -0.348 | 0.268 |
| AJ | -1.805 | -0.467 |
| Bibs02 | -0.91 | 0.098 |
| Bibs02c | -0.133 | -0.517 |
| BL6 | 0.571 | 1.274 |
| BL6a | 0.56 | 0.753 |
| BXD01 | -0.669 | 0.409 |
| BXD010 | 0.357 | 0.83 |
| BXD011 | 0.505 | 0.813 |
| BXD03 | 0.198 | 0.677 |
| BXD04 | -0.866 | 0.647 |
| BXD05 | 0.76 | 1.082 |
| BXD06 | -0.085 | 0.879 |
| BXD07 | 0.513 | 1.053 |
| BXD08 | 0.116 | 0.988 |
| BXD09 | 0.448 | 1.13 |
| CAST | -0.472 | 0.933 |
| CCcont | -0.341 | 0.861 |
| DS01 | -0.351 | 0.043 |
| DS02 | 0.101 | -0.588 |
| DS04 | -0.753 | 0.035 |
| DS0c | -2.861 | -1.042 |
| GP01 | 0.436 | 0.92 |
| GP02 | -0.236 | 1.1 |
| GP0c | 0.528 | 1.231 |
| NOD | -1.681 | 1.565 |
| NZO | 0.139 | 0.072 |
| PWK | -0.709 | 0.139 |
| H37Rv_KO_CtpC | 1.027 | 1.99 |
| H37Rv_KO_CtpD | 2.402 | 1.77 |
| H37Rv_KO_Rv1272 | 0.64 | 2.196 |
| H37Rv_KO_SugABC | 0.644 | 1.088 |
| H37Rv_KO_MbtN | -0.596 | 2.146 |
| Trans05 | 1.133 | 2.226 |
| macrophage_unactivated | -0.83 | 0.524 |
| IL1 | -0.323 | 0.492 |
| Rapamycin | -0.319 | 0.193 |
| Tcell | -1.401 | 0.401 |
| GMCSF | -0.227 | 1.159 |
| IFNab | -0.78 | 0.671 |
| IFNg | -0.433 | 1.013 |
| IFNg_GMCSF1 | -1.775 | 1.071 |
| Rv1432_day32 | 0.374 | 0.209 |
| Rv1565c_day32 | 1.031 | -0.22 |
| secA2_input | -2.661 | -0.512 |
| delta_Rv3594 | -0.28 | 0.18 |
| delta_Rv3717 | -0.634 | 0.088 |
| delta_Rv3811 | 0.326 | -0.311 |
| delta_Rv0954 | -0.315 | 0.026 |
| PonA1 | -1.297 | -0.325 |
| EccD1_KO | -1.342 | -0.217 |
| EspI_KO | -1.03 | -0.031 |
| PE35_KO | 0.613 | -0.128 |
| PPE68_KO | -0.787 | 0.0 |
| glycerol2 | -1.956 | -0.028 |
| lignocerate | -0.912 | 0.564 |
| oleate | -1.062 | -0.362 |
| phosphatidylcholine | -0.825 | 0.395 |
| acetate | 0.239 | 0.721 |
| glucAc | -0.19 | 0.657 |
| Rv0950ko | -0.745 | 0.229 |
| Rv1096ko | -1.535 | -0.57 |
| Rv3684ko | -2.161 | -0.789 |
| delta_otsA_trehalose | -0.792 | -0.25 |