Top 10 genes with highest correlation to Rv1493/mutB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1314c/- | (cc=0.7811) | info on Rv1314c/- |
| Rv0256c/PPE2 | (cc=0.773) | info on Rv0256c/PPE2 |
| Rv3616c/espA | (cc=0.7508) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.7495) | info on Rv3614c/espD |
| Rv1492/mutA | (cc=0.7426) | info on Rv1492/mutA |
| Rv3551/- | (cc=0.7286) | info on Rv3551/- |
| Rv3197/- | (cc=0.7252) | info on Rv3197/- |
| Rv0485/- | (cc=0.7138) | info on Rv0485/- |
| Rv1589/bioB | (cc=0.7035) | info on Rv1589/bioB |
| Rv1568/bioA | (cc=0.7019) | info on Rv1568/bioA |
Correlation of Rv1493/mutB with Rv3551/-
Normalized LFCs for Rv1493/mutB:
(description and provenance of datasets)
| Rv1493/mutB | Rv3551/- | |
| Fe_supp_jason_reseq | 0.581 | 0.737 |
| low_pH_jason_reseq | -0.313 | -0.647 |
| NO_jason_reseq | -0.764 | -0.601 |
| B6_jason_reseq | -2.724 | -1.96 |
| MHCII_jason_reseq | -0.977 | -1.726 |
| Isoniazid02 | 1.15 | -0.842 |
| Rifampicin4 | 0.1 | -0.165 |
| Ethambutol3 | -0.046 | -1.515 |
| Meropenem3 | 0.785 | 0.734 |
| Vancomycin16 | 0.239 | -1.008 |
| Rv2680_day32 | -0.936 | -1.788 |
| H37Rv_KO_MarP | 0.277 | 0.246 |
| hypoxia_3wks | -0.251 | 0.08 |
| hypoxia_6wks | -0.363 | -0.693 |
| glycerol | -0.332 | 1.148 |
| cholesterol | -0.295 | -3.657 |
| AJ | -1.839 | -5.857 |
| Bibs02 | -0.591 | -4.616 |
| Bibs02c | -0.565 | -5.282 |
| BL6 | -1.356 | -2.92 |
| BL6a | -1.333 | -5.001 |
| BXD01 | -1.274 | -3.288 |
| BXD010 | -0.335 | -2.306 |
| BXD011 | -0.569 | -2.59 |
| BXD03 | -1.13 | -3.28 |
| BXD04 | -0.771 | -2.999 |
| BXD05 | -0.906 | -3.029 |
| BXD06 | -0.95 | -3.37 |
| BXD07 | -0.897 | -3.496 |
| BXD08 | -1.093 | -3.226 |
| BXD09 | -1.195 | -3.408 |
| CAST | -1.925 | -4.838 |
| CCcont | -0.317 | -0.733 |
| DS01 | -1.839 | -5.963 |
| DS02 | -3.239 | -5.49 |
| DS04 | -2.067 | -4.367 |
| DS0c | -1.431 | -5.476 |
| GP01 | 0.274 | -2.304 |
| GP02 | -0.671 | -1.942 |
| GP0c | -0.008 | -1.016 |
| NOD | -0.317 | -1.847 |
| NZO | -1.244 | -4.838 |
| PWK | -1.154 | -4.757 |
| H37Rv_KO_CtpC | -1.243 | -3.94 |
| H37Rv_KO_CtpD | 0.216 | -2.576 |
| H37Rv_KO_Rv1272 | -0.047 | -3.56 |
| H37Rv_KO_SugABC | -0.903 | -1.783 |
| H37Rv_KO_MbtN | -1.563 | -1.855 |
| Trans05 | -0.982 | -3.299 |
| macrophage_unactivated | 0.442 | 0.66 |
| IL1 | 0.507 | -1.605 |
| Rapamycin | 0.617 | -1.093 |
| Tcell | -0.029 | -2.209 |
| GMCSF | 0.243 | 0.752 |
| IFNab | 0.423 | 2.283 |
| IFNg | 0.518 | -0.249 |
| IFNg_GMCSF1 | 0.537 | -0.606 |
| Rv1432_day32 | 0.027 | -3.863 |
| Rv1565c_day32 | -0.897 | -3.884 |
| secA2_input | 0.149 | -0.54 |
| delta_Rv3594 | 0.0 | -0.26 |
| delta_Rv3717 | -0.238 | 0.191 |
| delta_Rv3811 | -0.1 | 0.556 |
| delta_Rv0954 | 0.359 | 1.149 |
| PonA1 | -0.412 | 0.384 |
| EccD1_KO | 0.793 | 1.246 |
| EspI_KO | 0.619 | 0.539 |
| PE35_KO | 0.75 | 1.105 |
| PPE68_KO | 0.694 | 1.139 |
| glycerol2 | -0.017 | 0.289 |
| lignocerate | 0.202 | 0.785 |
| oleate | 0.065 | -0.537 |
| phosphatidylcholine | 0.246 | -0.106 |
| acetate | 0.095 | 2.234 |
| glucAc | 0.172 | 1.052 |
| Rv0950ko | 0.109 | 1.903 |
| Rv1096ko | -0.464 | 0.329 |
| Rv3684ko | -0.121 | 0.092 |
| delta_otsA_trehalose | 0.198 | 0.325 |