Top 10 genes with highest correlation to Rv1493/mutB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1314c/- | (cc=0.7811) | info on Rv1314c/- |
| Rv0256c/PPE2 | (cc=0.773) | info on Rv0256c/PPE2 |
| Rv3616c/espA | (cc=0.7508) | info on Rv3616c/espA |
| Rv3614c/espD | (cc=0.7495) | info on Rv3614c/espD |
| Rv1492/mutA | (cc=0.7426) | info on Rv1492/mutA |
| Rv3551/- | (cc=0.7286) | info on Rv3551/- |
| Rv3197/- | (cc=0.7252) | info on Rv3197/- |
| Rv0485/- | (cc=0.7138) | info on Rv0485/- |
| Rv1589/bioB | (cc=0.7035) | info on Rv1589/bioB |
| Rv1568/bioA | (cc=0.7019) | info on Rv1568/bioA |
Correlation of Rv1493/mutB with Rv1589/bioB
Normalized LFCs for Rv1493/mutB:
(description and provenance of datasets)
| Rv1493/mutB | Rv1589/bioB | |
| Fe_supp_jason_reseq | 0.581 | 0.849 |
| low_pH_jason_reseq | -0.313 | -1.268 |
| NO_jason_reseq | -0.764 | 0.223 |
| B6_jason_reseq | -2.724 | -3.371 |
| MHCII_jason_reseq | -0.977 | -2.397 |
| Isoniazid02 | 1.15 | -1.656 |
| Rifampicin4 | 0.1 | 0.198 |
| Ethambutol3 | -0.046 | -0.174 |
| Meropenem3 | 0.785 | 1.255 |
| Vancomycin16 | 0.239 | -0.138 |
| Rv2680_day32 | -0.936 | -4.017 |
| H37Rv_KO_MarP | 0.277 | -0.392 |
| hypoxia_3wks | -0.251 | 0.227 |
| hypoxia_6wks | -0.363 | -0.42 |
| glycerol | -0.332 | -6.0 |
| cholesterol | -0.295 | -4.449 |
| AJ | -1.839 | -6.0 |
| Bibs02 | -0.591 | -5.616 |
| Bibs02c | -0.565 | -6.0 |
| BL6 | -1.356 | -3.718 |
| BL6a | -1.333 | -5.111 |
| BXD01 | -1.274 | -4.001 |
| BXD010 | -0.335 | -3.934 |
| BXD011 | -0.569 | -3.206 |
| BXD03 | -1.13 | -3.58 |
| BXD04 | -0.771 | -1.441 |
| BXD05 | -0.906 | -3.159 |
| BXD06 | -0.95 | -4.1 |
| BXD07 | -0.897 | -4.253 |
| BXD08 | -1.093 | -3.832 |
| BXD09 | -1.195 | -4.316 |
| CAST | -1.925 | -5.943 |
| CCcont | -0.317 | -0.025 |
| DS01 | -1.839 | -6.0 |
| DS02 | -3.239 | -6.0 |
| DS04 | -2.067 | -3.872 |
| DS0c | -1.431 | -6.0 |
| GP01 | 0.274 | -2.317 |
| GP02 | -0.671 | -1.832 |
| GP0c | -0.008 | 0.733 |
| NOD | -0.317 | -5.519 |
| NZO | -1.244 | -5.929 |
| PWK | -1.154 | -5.83 |
| H37Rv_KO_CtpC | -1.243 | -4.192 |
| H37Rv_KO_CtpD | 0.216 | -2.195 |
| H37Rv_KO_Rv1272 | -0.047 | -2.444 |
| H37Rv_KO_SugABC | -0.903 | -2.014 |
| H37Rv_KO_MbtN | -1.563 | -0.331 |
| Trans05 | -0.982 | -3.554 |
| macrophage_unactivated | 0.442 | 2.333 |
| IL1 | 0.507 | 0.181 |
| Rapamycin | 0.617 | -0.319 |
| Tcell | -0.029 | 1.492 |
| GMCSF | 0.243 | 1.706 |
| IFNab | 0.423 | 3.099 |
| IFNg | 0.518 | 0.353 |
| IFNg_GMCSF1 | 0.537 | -0.773 |
| Rv1432_day32 | 0.027 | -4.133 |
| Rv1565c_day32 | -0.897 | -4.498 |
| secA2_input | 0.149 | 0.099 |
| delta_Rv3594 | 0.0 | -0.112 |
| delta_Rv3717 | -0.238 | 0.152 |
| delta_Rv3811 | -0.1 | 0.345 |
| delta_Rv0954 | 0.359 | 0.181 |
| PonA1 | -0.412 | -0.118 |
| EccD1_KO | 0.793 | -0.257 |
| EspI_KO | 0.619 | -0.305 |
| PE35_KO | 0.75 | -0.414 |
| PPE68_KO | 0.694 | 0.07 |
| glycerol2 | -0.017 | 0.0 |
| lignocerate | 0.202 | 0.168 |
| oleate | 0.065 | 0.0 |
| phosphatidylcholine | 0.246 | 0.0 |
| acetate | 0.095 | 0.63 |
| glucAc | 0.172 | 0.392 |
| Rv0950ko | 0.109 | -0.434 |
| Rv1096ko | -0.464 | -0.112 |
| Rv3684ko | -0.121 | -0.868 |
| delta_otsA_trehalose | 0.198 | 1.462 |