Top 10 genes with highest correlation to Rv1468c/PE_PGRS29:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2205c/- | (cc=0.5487) | info on Rv2205c/- |
| Rv3344c/PE_PGRS49 | (cc=0.4809) | info on Rv3344c/PE_PGRS49 |
| Rv1840c/PE_PGRS34 | (cc=0.4791) | info on Rv1840c/PE_PGRS34 |
| Rv3892c/PPE69 | (cc=0.4789) | info on Rv3892c/PPE69 |
| Rv1004c/- | (cc=0.4679) | info on Rv1004c/- |
| Rv1452c/PE_PGRS28 | (cc=0.463) | info on Rv1452c/PE_PGRS28 |
| Rv1992c/ctpG | (cc=0.4583) | info on Rv1992c/ctpG |
| Rv0250c/- | (cc=0.4558) | info on Rv0250c/- |
| Rv0492c/- | (cc=0.4489) | info on Rv0492c/- |
| Rv2519/PE26 | (cc=0.4469) | info on Rv2519/PE26 |
Correlation of Rv1468c/PE_PGRS29 with Rv3892c/PPE69
Normalized LFCs for Rv1468c/PE_PGRS29:
(description and provenance of datasets)
| Rv1468c/PE_PGRS29 | Rv3892c/PPE69 | |
| Fe_supp_jason_reseq | 0.425 | 0.262 |
| low_pH_jason_reseq | 0.274 | -0.467 |
| NO_jason_reseq | -1.229 | -1.601 |
| B6_jason_reseq | -0.718 | 0.094 |
| MHCII_jason_reseq | -0.801 | -0.108 |
| Isoniazid02 | 0.303 | 2.267 |
| Rifampicin4 | 1.968 | 0.723 |
| Ethambutol3 | 1.278 | 2.274 |
| Meropenem3 | 1.473 | -0.126 |
| Vancomycin16 | 0.43 | 0.058 |
| Rv2680_day32 | -0.64 | -1.335 |
| H37Rv_KO_MarP | -0.049 | 0.555 |
| hypoxia_3wks | -0.694 | -0.658 |
| hypoxia_6wks | -0.735 | -0.912 |
| glycerol | 0.0 | 0.257 |
| cholesterol | -0.388 | 0.441 |
| AJ | 1.612 | 1.385 |
| Bibs02 | 0.389 | 0.911 |
| Bibs02c | 0.0 | 0.453 |
| BL6 | -0.835 | -0.247 |
| BL6a | 0.0 | 0.143 |
| BXD01 | 0.235 | -0.973 |
| BXD010 | -0.675 | -0.253 |
| BXD011 | -0.078 | -0.23 |
| BXD03 | -0.2 | 0.108 |
| BXD04 | 0.024 | 0.019 |
| BXD05 | 0.308 | -0.161 |
| BXD06 | -0.428 | -1.104 |
| BXD07 | 0.339 | -0.781 |
| BXD08 | 0.519 | 0.288 |
| BXD09 | 0.054 | -0.331 |
| CAST | 0.415 | 1.049 |
| CCcont | 0.168 | -0.578 |
| DS01 | 0.652 | 0.898 |
| DS02 | 0.789 | 1.054 |
| DS04 | 1.835 | 1.703 |
| DS0c | -0.178 | 1.092 |
| GP01 | 1.93 | 0.3 |
| GP02 | 0.863 | 0.482 |
| GP0c | 1.155 | -0.222 |
| NOD | -0.436 | 0.083 |
| NZO | 0.751 | 0.159 |
| PWK | 0.254 | 0.196 |
| H37Rv_KO_CtpC | 1.094 | 0.107 |
| H37Rv_KO_CtpD | 2.032 | 0.32 |
| H37Rv_KO_Rv1272 | 1.204 | 0.774 |
| H37Rv_KO_SugABC | 0.346 | -0.474 |
| H37Rv_KO_MbtN | 1.692 | -0.023 |
| Trans05 | -0.193 | 0.449 |
| macrophage_unactivated | -0.117 | -1.449 |
| IL1 | -0.169 | 0.341 |
| Rapamycin | -0.608 | -0.068 |
| Tcell | 0.059 | -0.45 |
| GMCSF | 0.143 | 0.058 |
| IFNab | -0.599 | -0.345 |
| IFNg | -1.141 | -0.029 |
| IFNg_GMCSF1 | 0.798 | -0.321 |
| Rv1432_day32 | 0.07 | -0.107 |
| Rv1565c_day32 | -1.33 | -0.959 |
| secA2_input | -0.462 | 0.653 |
| delta_Rv3594 | 0.6 | -0.291 |
| delta_Rv3717 | 0.865 | 0.283 |
| delta_Rv3811 | 0.708 | -0.269 |
| delta_Rv0954 | 1.499 | 0.77 |
| PonA1 | 0.99 | -0.241 |
| EccD1_KO | -0.523 | -0.372 |
| EspI_KO | -0.787 | -0.414 |
| PE35_KO | -0.505 | -0.764 |
| PPE68_KO | -0.291 | -0.214 |
| glycerol2 | -0.22 | 0.412 |
| lignocerate | 0.033 | 0.06 |
| oleate | 0.057 | 0.597 |
| phosphatidylcholine | -0.262 | 0.069 |
| acetate | -0.163 | 0.02 |
| glucAc | -0.491 | -0.762 |
| Rv0950ko | 0.202 | -0.106 |
| Rv1096ko | -0.127 | 0.0 |
| Rv3684ko | 0.177 | -0.609 |
| delta_otsA_trehalose | 0.284 | 1.319 |