Top 10 genes with highest correlation to Rv1468c/PE_PGRS29:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2205c/- | (cc=0.5487) | info on Rv2205c/- |
| Rv3344c/PE_PGRS49 | (cc=0.4809) | info on Rv3344c/PE_PGRS49 |
| Rv1840c/PE_PGRS34 | (cc=0.4791) | info on Rv1840c/PE_PGRS34 |
| Rv3892c/PPE69 | (cc=0.4789) | info on Rv3892c/PPE69 |
| Rv1004c/- | (cc=0.4679) | info on Rv1004c/- |
| Rv1452c/PE_PGRS28 | (cc=0.463) | info on Rv1452c/PE_PGRS28 |
| Rv1992c/ctpG | (cc=0.4583) | info on Rv1992c/ctpG |
| Rv0250c/- | (cc=0.4558) | info on Rv0250c/- |
| Rv0492c/- | (cc=0.4489) | info on Rv0492c/- |
| Rv2519/PE26 | (cc=0.4469) | info on Rv2519/PE26 |
Correlation of Rv1468c/PE_PGRS29 with Rv1992c/ctpG
Normalized LFCs for Rv1468c/PE_PGRS29:
(description and provenance of datasets)
| Rv1468c/PE_PGRS29 | Rv1992c/ctpG | |
| Fe_supp_jason_reseq | 0.425 | -0.123 |
| low_pH_jason_reseq | 0.274 | -0.356 |
| NO_jason_reseq | -1.229 | -0.452 |
| B6_jason_reseq | -0.718 | -0.546 |
| MHCII_jason_reseq | -0.801 | -0.501 |
| Isoniazid02 | 0.303 | 1.209 |
| Rifampicin4 | 1.968 | 0.525 |
| Ethambutol3 | 1.278 | 1.041 |
| Meropenem3 | 1.473 | 1.284 |
| Vancomycin16 | 0.43 | 0.647 |
| Rv2680_day32 | -0.64 | -0.526 |
| H37Rv_KO_MarP | -0.049 | 0.028 |
| hypoxia_3wks | -0.694 | 0.287 |
| hypoxia_6wks | -0.735 | -0.248 |
| glycerol | 0.0 | -0.238 |
| cholesterol | -0.388 | -0.419 |
| AJ | 1.612 | 0.079 |
| Bibs02 | 0.389 | 0.166 |
| Bibs02c | 0.0 | -0.073 |
| BL6 | -0.835 | -0.619 |
| BL6a | 0.0 | -0.263 |
| BXD01 | 0.235 | -0.355 |
| BXD010 | -0.675 | -1.141 |
| BXD011 | -0.078 | -0.362 |
| BXD03 | -0.2 | -0.588 |
| BXD04 | 0.024 | -0.022 |
| BXD05 | 0.308 | -0.287 |
| BXD06 | -0.428 | -0.417 |
| BXD07 | 0.339 | -0.666 |
| BXD08 | 0.519 | -0.298 |
| BXD09 | 0.054 | -0.695 |
| CAST | 0.415 | -0.654 |
| CCcont | 0.168 | -0.901 |
| DS01 | 0.652 | 0.11 |
| DS02 | 0.789 | 0.17 |
| DS04 | 1.835 | 0.399 |
| DS0c | -0.178 | 0.145 |
| GP01 | 1.93 | -0.291 |
| GP02 | 0.863 | 1.017 |
| GP0c | 1.155 | -0.236 |
| NOD | -0.436 | -0.319 |
| NZO | 0.751 | -0.178 |
| PWK | 0.254 | -0.212 |
| H37Rv_KO_CtpC | 1.094 | 0.034 |
| H37Rv_KO_CtpD | 2.032 | -0.211 |
| H37Rv_KO_Rv1272 | 1.204 | 0.07 |
| H37Rv_KO_SugABC | 0.346 | 0.135 |
| H37Rv_KO_MbtN | 1.692 | 0.522 |
| Trans05 | -0.193 | 0.065 |
| macrophage_unactivated | -0.117 | -0.123 |
| IL1 | -0.169 | -0.116 |
| Rapamycin | -0.608 | 0.184 |
| Tcell | 0.059 | -0.362 |
| GMCSF | 0.143 | 0.454 |
| IFNab | -0.599 | -0.212 |
| IFNg | -1.141 | -0.385 |
| IFNg_GMCSF1 | 0.798 | -0.245 |
| Rv1432_day32 | 0.07 | 0.117 |
| Rv1565c_day32 | -1.33 | 0.208 |
| secA2_input | -0.462 | -0.47 |
| delta_Rv3594 | 0.6 | 0.772 |
| delta_Rv3717 | 0.865 | 0.515 |
| delta_Rv3811 | 0.708 | 0.642 |
| delta_Rv0954 | 1.499 | 0.702 |
| PonA1 | 0.99 | 0.57 |
| EccD1_KO | -0.523 | 0.234 |
| EspI_KO | -0.787 | -0.034 |
| PE35_KO | -0.505 | 0.0 |
| PPE68_KO | -0.291 | -0.509 |
| glycerol2 | -0.22 | 0.042 |
| lignocerate | 0.033 | -0.262 |
| oleate | 0.057 | 0.407 |
| phosphatidylcholine | -0.262 | 0.178 |
| acetate | -0.163 | -0.898 |
| glucAc | -0.491 | -0.912 |
| Rv0950ko | 0.202 | 0.434 |
| Rv1096ko | -0.127 | -0.121 |
| Rv3684ko | 0.177 | -0.265 |
| delta_otsA_trehalose | 0.284 | -0.233 |