Top 10 genes with highest correlation to Rv1468c/PE_PGRS29:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2205c/- | (cc=0.5487) | info on Rv2205c/- |
| Rv3344c/PE_PGRS49 | (cc=0.4809) | info on Rv3344c/PE_PGRS49 |
| Rv1840c/PE_PGRS34 | (cc=0.4791) | info on Rv1840c/PE_PGRS34 |
| Rv3892c/PPE69 | (cc=0.4789) | info on Rv3892c/PPE69 |
| Rv1004c/- | (cc=0.4679) | info on Rv1004c/- |
| Rv1452c/PE_PGRS28 | (cc=0.463) | info on Rv1452c/PE_PGRS28 |
| Rv1992c/ctpG | (cc=0.4583) | info on Rv1992c/ctpG |
| Rv0250c/- | (cc=0.4558) | info on Rv0250c/- |
| Rv0492c/- | (cc=0.4489) | info on Rv0492c/- |
| Rv2519/PE26 | (cc=0.4469) | info on Rv2519/PE26 |
Correlation of Rv1468c/PE_PGRS29 with Rv1452c/PE_PGRS28
Normalized LFCs for Rv1468c/PE_PGRS29:
(description and provenance of datasets)
| Rv1468c/PE_PGRS29 | Rv1452c/PE_PGRS28 | |
| Fe_supp_jason_reseq | 0.425 | -0.046 |
| low_pH_jason_reseq | 0.274 | -0.765 |
| NO_jason_reseq | -1.229 | -0.396 |
| B6_jason_reseq | -0.718 | -0.24 |
| MHCII_jason_reseq | -0.801 | 0.75 |
| Isoniazid02 | 0.303 | 1.064 |
| Rifampicin4 | 1.968 | 0.636 |
| Ethambutol3 | 1.278 | 0.911 |
| Meropenem3 | 1.473 | 1.12 |
| Vancomycin16 | 0.43 | 0.027 |
| Rv2680_day32 | -0.64 | -0.669 |
| H37Rv_KO_MarP | -0.049 | -0.555 |
| hypoxia_3wks | -0.694 | 0.0 |
| hypoxia_6wks | -0.735 | -0.411 |
| glycerol | 0.0 | 1.849 |
| cholesterol | -0.388 | 0.649 |
| AJ | 1.612 | 1.04 |
| Bibs02 | 0.389 | 1.558 |
| Bibs02c | 0.0 | 1.122 |
| BL6 | -0.835 | 0.057 |
| BL6a | 0.0 | 0.462 |
| BXD01 | 0.235 | 0.149 |
| BXD010 | -0.675 | -0.125 |
| BXD011 | -0.078 | 0.306 |
| BXD03 | -0.2 | 0.132 |
| BXD04 | 0.024 | 0.1 |
| BXD05 | 0.308 | 0.667 |
| BXD06 | -0.428 | -0.187 |
| BXD07 | 0.339 | 0.323 |
| BXD08 | 0.519 | 0.34 |
| BXD09 | 0.054 | 0.039 |
| CAST | 0.415 | 0.719 |
| CCcont | 0.168 | -0.325 |
| DS01 | 0.652 | 0.31 |
| DS02 | 0.789 | 0.474 |
| DS04 | 1.835 | 1.313 |
| DS0c | -0.178 | -0.041 |
| GP01 | 1.93 | 0.825 |
| GP02 | 0.863 | 1.219 |
| GP0c | 1.155 | 1.25 |
| NOD | -0.436 | 1.396 |
| NZO | 0.751 | 0.595 |
| PWK | 0.254 | 0.192 |
| H37Rv_KO_CtpC | 1.094 | 0.993 |
| H37Rv_KO_CtpD | 2.032 | 1.665 |
| H37Rv_KO_Rv1272 | 1.204 | -0.095 |
| H37Rv_KO_SugABC | 0.346 | 0.531 |
| H37Rv_KO_MbtN | 1.692 | 0.843 |
| Trans05 | -0.193 | 0.095 |
| macrophage_unactivated | -0.117 | -0.028 |
| IL1 | -0.169 | 0.05 |
| Rapamycin | -0.608 | -0.276 |
| Tcell | 0.059 | -0.74 |
| GMCSF | 0.143 | 0.734 |
| IFNab | -0.599 | -0.656 |
| IFNg | -1.141 | -0.048 |
| IFNg_GMCSF1 | 0.798 | -0.057 |
| Rv1432_day32 | 0.07 | 0.754 |
| Rv1565c_day32 | -1.33 | -0.635 |
| secA2_input | -0.462 | -0.653 |
| delta_Rv3594 | 0.6 | -0.217 |
| delta_Rv3717 | 0.865 | 0.477 |
| delta_Rv3811 | 0.708 | -0.125 |
| delta_Rv0954 | 1.499 | -0.667 |
| PonA1 | 0.99 | -0.299 |
| EccD1_KO | -0.523 | 0.724 |
| EspI_KO | -0.787 | -0.345 |
| PE35_KO | -0.505 | 0.079 |
| PPE68_KO | -0.291 | -0.202 |
| glycerol2 | -0.22 | -0.581 |
| lignocerate | 0.033 | -0.567 |
| oleate | 0.057 | -0.345 |
| phosphatidylcholine | -0.262 | -0.164 |
| acetate | -0.163 | -0.982 |
| glucAc | -0.491 | 0.026 |
| Rv0950ko | 0.202 | 0.042 |
| Rv1096ko | -0.127 | 0.223 |
| Rv3684ko | 0.177 | -0.255 |
| delta_otsA_trehalose | 0.284 | -1.019 |