Top 10 genes with highest correlation to Rv1468c/PE_PGRS29:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2205c/- | (cc=0.5487) | info on Rv2205c/- |
| Rv3344c/PE_PGRS49 | (cc=0.4809) | info on Rv3344c/PE_PGRS49 |
| Rv1840c/PE_PGRS34 | (cc=0.4791) | info on Rv1840c/PE_PGRS34 |
| Rv3892c/PPE69 | (cc=0.4789) | info on Rv3892c/PPE69 |
| Rv1004c/- | (cc=0.4679) | info on Rv1004c/- |
| Rv1452c/PE_PGRS28 | (cc=0.463) | info on Rv1452c/PE_PGRS28 |
| Rv1992c/ctpG | (cc=0.4583) | info on Rv1992c/ctpG |
| Rv0250c/- | (cc=0.4558) | info on Rv0250c/- |
| Rv0492c/- | (cc=0.4489) | info on Rv0492c/- |
| Rv2519/PE26 | (cc=0.4469) | info on Rv2519/PE26 |
Correlation of Rv1468c/PE_PGRS29 with Rv2205c/-
Normalized LFCs for Rv1468c/PE_PGRS29:
(description and provenance of datasets)
| Rv1468c/PE_PGRS29 | Rv2205c/- | |
| Fe_supp_jason_reseq | 0.425 | 0.469 |
| low_pH_jason_reseq | 0.274 | 0.0 |
| NO_jason_reseq | -1.229 | -0.368 |
| B6_jason_reseq | -0.718 | -0.02 |
| MHCII_jason_reseq | -0.801 | 0.0 |
| Isoniazid02 | 0.303 | 0.646 |
| Rifampicin4 | 1.968 | 0.455 |
| Ethambutol3 | 1.278 | 0.845 |
| Meropenem3 | 1.473 | 1.636 |
| Vancomycin16 | 0.43 | -0.329 |
| Rv2680_day32 | -0.64 | -0.144 |
| H37Rv_KO_MarP | -0.049 | 0.704 |
| hypoxia_3wks | -0.694 | -0.367 |
| hypoxia_6wks | -0.735 | -1.161 |
| glycerol | 0.0 | 0.13 |
| cholesterol | -0.388 | -0.108 |
| AJ | 1.612 | 0.602 |
| Bibs02 | 0.389 | 0.07 |
| Bibs02c | 0.0 | 0.294 |
| BL6 | -0.835 | -0.654 |
| BL6a | 0.0 | 0.108 |
| BXD01 | 0.235 | -0.014 |
| BXD010 | -0.675 | -0.483 |
| BXD011 | -0.078 | -0.854 |
| BXD03 | -0.2 | -0.151 |
| BXD04 | 0.024 | 0.179 |
| BXD05 | 0.308 | -0.192 |
| BXD06 | -0.428 | -0.422 |
| BXD07 | 0.339 | -0.468 |
| BXD08 | 0.519 | -0.342 |
| BXD09 | 0.054 | -0.402 |
| CAST | 0.415 | 0.324 |
| CCcont | 0.168 | -0.767 |
| DS01 | 0.652 | 0.388 |
| DS02 | 0.789 | 0.621 |
| DS04 | 1.835 | 0.822 |
| DS0c | -0.178 | 0.047 |
| GP01 | 1.93 | 0.763 |
| GP02 | 0.863 | 0.318 |
| GP0c | 1.155 | 0.332 |
| NOD | -0.436 | 0.464 |
| NZO | 0.751 | 0.535 |
| PWK | 0.254 | -0.112 |
| H37Rv_KO_CtpC | 1.094 | -0.112 |
| H37Rv_KO_CtpD | 2.032 | -0.628 |
| H37Rv_KO_Rv1272 | 1.204 | 0.245 |
| H37Rv_KO_SugABC | 0.346 | -0.574 |
| H37Rv_KO_MbtN | 1.692 | 1.578 |
| Trans05 | -0.193 | 0.078 |
| macrophage_unactivated | -0.117 | -0.735 |
| IL1 | -0.169 | -0.86 |
| Rapamycin | -0.608 | -0.994 |
| Tcell | 0.059 | -0.583 |
| GMCSF | 0.143 | 0.024 |
| IFNab | -0.599 | -0.774 |
| IFNg | -1.141 | -0.898 |
| IFNg_GMCSF1 | 0.798 | 0.421 |
| Rv1432_day32 | 0.07 | -0.541 |
| Rv1565c_day32 | -1.33 | 0.117 |
| secA2_input | -0.462 | -0.645 |
| delta_Rv3594 | 0.6 | 0.489 |
| delta_Rv3717 | 0.865 | 0.228 |
| delta_Rv3811 | 0.708 | 1.023 |
| delta_Rv0954 | 1.499 | 0.213 |
| PonA1 | 0.99 | 0.309 |
| EccD1_KO | -0.523 | 0.506 |
| EspI_KO | -0.787 | 0.499 |
| PE35_KO | -0.505 | 0.07 |
| PPE68_KO | -0.291 | -0.106 |
| glycerol2 | -0.22 | -0.957 |
| lignocerate | 0.033 | -0.578 |
| oleate | 0.057 | -0.242 |
| phosphatidylcholine | -0.262 | -0.422 |
| acetate | -0.163 | -0.678 |
| glucAc | -0.491 | -0.955 |
| Rv0950ko | 0.202 | 0.694 |
| Rv1096ko | -0.127 | -0.259 |
| Rv3684ko | 0.177 | 0.265 |
| delta_otsA_trehalose | 0.284 | 0.673 |