TnSeqCorr

Top 10 genes with highest correlation to Rv1447c/zwf2:

update plotcorrelationlink to info on gene
Rv2474c/- (cc=0.5512) info on Rv2474c/-
Rv2475c/- (cc=0.5282) info on Rv2475c/-
Rv2739c/- (cc=0.5097) info on Rv2739c/-
Rv2613c/- (cc=0.5073) info on Rv2613c/-
Rv3208A/TB9.4 (cc=0.5072) info on Rv3208A/TB9.4
Rv0079/- (cc=0.4992) info on Rv0079/-
Rv1657/argR (cc=0.4932) info on Rv1657/argR
Rv1287/- (cc=0.4849) info on Rv1287/-
Rv1852/ureG (cc=0.4819) info on Rv1852/ureG
Rv0243/fadA2 (cc=0.4817) info on Rv0243/fadA2

Correlation of Rv1447c/zwf2 with Rv2475c/-

Normalized LFCs for Rv1447c/zwf2:
(description and provenance of datasets)
Rv1447c/zwf2Rv2475c/-
Fe_supp_jason_reseq

0.098

-0.982

low_pH_jason_reseq

-0.184

0.283

NO_jason_reseq

-2.105

-5.224

B6_jason_reseq

-1.063

-3.595

MHCII_jason_reseq

-0.521

-1.986

Isoniazid02

0.941

-0.611

Rifampicin4

0.2

-0.707

Ethambutol3

-0.568

-1.53

Meropenem3

-0.093

-2.11

Vancomycin16

0.244

-0.743

Rv2680_day32

-1.814

-3.788

H37Rv_KO_MarP

0.56

0.442

hypoxia_3wks

-0.594

0.335

hypoxia_6wks

-0.658

-0.382

glycerol

-0.503

-2.036

cholesterol

-0.547

-0.89

AJ

-1.039

-2.588

Bibs02

-0.384

-0.715

Bibs02c

-1.206

-2.236

BL6

-0.623

-0.885

BL6a

-1.089

-1.832

BXD01

-0.985

-0.607

BXD010

-1.197

-0.688

BXD011

-0.602

-1.797

BXD03

-1.836

-1.197

BXD04

0.148

0.047

BXD05

-0.602

-1.545

BXD06

-0.885

-1.386

BXD07

-1.141

-0.921

BXD08

-1.73

-1.794

BXD09

-1.158

-1.281

CAST

0.34

-1.758

CCcont

-0.048

0.752

DS01

-0.736

-2.152

DS02

-0.217

-1.763

DS04

-0.298

-2.195

DS0c

-0.141

-2.065

GP01

1.327

-0.732

GP02

-0.955

-1.911

GP0c

-0.063

-1.151

NOD

0.48

-3.267

NZO

-1.445

-2.323

PWK

0.206

-1.867

H37Rv_KO_CtpC

0.39

-1.736

H37Rv_KO_CtpD

0.64

-1.012

H37Rv_KO_Rv1272

-0.296

-0.998

H37Rv_KO_SugABC

-1.404

-1.485

H37Rv_KO_MbtN

-0.747

1.143

Trans05

-1.774

-1.762

macrophage_unactivated

-0.17

0.36

IL1

-1.284

-0.489

Rapamycin

-1.218

0.497

Tcell

-0.267

-0.733

GMCSF

-0.694

-1.927

IFNab

0.387

0.067

IFNg

-0.454

-2.403

IFNg_GMCSF1

-0.628

-1.678

Rv1432_day32

-1.965

-3.601

Rv1565c_day32

0.586

-1.148

secA2_input

-0.64

1.331

delta_Rv3594

0.759

0.054

delta_Rv3717

0.581

-0.497

delta_Rv3811

-0.109

-0.345

delta_Rv0954

0.903

0.176

PonA1

0.08

1.432

EccD1_KO

0.957

-0.151

EspI_KO

0.211

1.027

PE35_KO

-0.169

0.683

PPE68_KO

-0.25

0.918

glycerol2

0.38

1.014

lignocerate

0.957

1.396

oleate

-0.76

-0.194

phosphatidylcholine

-0.3

1.217

acetate

2.08

1.019

glucAc

1.722

0.892

Rv0950ko

0.057

0.799

Rv1096ko

-0.057

0.872

Rv3684ko

0.413

1.32

delta_otsA_trehalose

0.77

0.871