TnSeqCorr

Top 10 genes with highest correlation to Rv1447c/zwf2:

update plotcorrelationlink to info on gene
Rv2474c/- (cc=0.5512) info on Rv2474c/-
Rv2475c/- (cc=0.5282) info on Rv2475c/-
Rv2739c/- (cc=0.5097) info on Rv2739c/-
Rv2613c/- (cc=0.5073) info on Rv2613c/-
Rv3208A/TB9.4 (cc=0.5072) info on Rv3208A/TB9.4
Rv0079/- (cc=0.4992) info on Rv0079/-
Rv1657/argR (cc=0.4932) info on Rv1657/argR
Rv1287/- (cc=0.4849) info on Rv1287/-
Rv1852/ureG (cc=0.4819) info on Rv1852/ureG
Rv0243/fadA2 (cc=0.4817) info on Rv0243/fadA2

Correlation of Rv1447c/zwf2 with Rv1852/ureG

Normalized LFCs for Rv1447c/zwf2:
(description and provenance of datasets)
Rv1447c/zwf2Rv1852/ureG
Fe_supp_jason_reseq

0.098

-0.595

low_pH_jason_reseq

-0.184

-1.722

NO_jason_reseq

-2.105

-0.507

B6_jason_reseq

-1.063

-2.156

MHCII_jason_reseq

-0.521

-2.675

Isoniazid02

0.941

0.416

Rifampicin4

0.2

-0.349

Ethambutol3

-0.568

0.084

Meropenem3

-0.093

0.672

Vancomycin16

0.244

0.0

Rv2680_day32

-1.814

-2.715

H37Rv_KO_MarP

0.56

0.837

hypoxia_3wks

-0.594

-1.95

hypoxia_6wks

-0.658

-1.169

glycerol

-0.503

-0.844

cholesterol

-0.547

0.341

AJ

-1.039

0.449

Bibs02

-0.384

-0.053

Bibs02c

-1.206

-0.497

BL6

-0.623

0.103

BL6a

-1.089

-1.808

BXD01

-0.985

-1.786

BXD010

-1.197

-2.505

BXD011

-0.602

-0.67

BXD03

-1.836

-0.738

BXD04

0.148

-1.434

BXD05

-0.602

-0.359

BXD06

-0.885

-1.859

BXD07

-1.141

-1.841

BXD08

-1.73

-0.832

BXD09

-1.158

-1.404

CAST

0.34

-0.108

CCcont

-0.048

-0.829

DS01

-0.736

-1.711

DS02

-0.217

-0.696

DS04

-0.298

-0.637

DS0c

-0.141

0.281

GP01

1.327

-1.354

GP02

-0.955

-1.057

GP0c

-0.063

-1.728

NOD

0.48

-1.679

NZO

-1.445

0.451

PWK

0.206

-0.176

H37Rv_KO_CtpC

0.39

-1.598

H37Rv_KO_CtpD

0.64

0.105

H37Rv_KO_Rv1272

-0.296

0.293

H37Rv_KO_SugABC

-1.404

-0.825

H37Rv_KO_MbtN

-0.747

0.029

Trans05

-1.774

0.727

macrophage_unactivated

-0.17

0.581

IL1

-1.284

-0.303

Rapamycin

-1.218

-0.313

Tcell

-0.267

-0.583

GMCSF

-0.694

-0.515

IFNab

0.387

1.016

IFNg

-0.454

-0.152

IFNg_GMCSF1

-0.628

0.842

Rv1432_day32

-1.965

-0.18

Rv1565c_day32

0.586

0.058

secA2_input

-0.64

1.268

delta_Rv3594

0.759

1.199

delta_Rv3717

0.581

0.559

delta_Rv3811

-0.109

0.0

delta_Rv0954

0.903

2.305

PonA1

0.08

-2.069

EccD1_KO

0.957

-0.635

EspI_KO

0.211

-0.319

PE35_KO

-0.169

1.076

PPE68_KO

-0.25

-0.038

glycerol2

0.38

3.213

lignocerate

0.957

3.973

oleate

-0.76

0.196

phosphatidylcholine

-0.3

3.169

acetate

2.08

3.498

glucAc

1.722

3.418

Rv0950ko

0.057

-0.151

Rv1096ko

-0.057

0.0

Rv3684ko

0.413

0.789

delta_otsA_trehalose

0.77

2.628