Top 10 genes with highest correlation to Rv1431/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1522c/mmpL12 | (cc=0.5518) | info on Rv1522c/mmpL12 |
| Rv1671/- | (cc=0.5125) | info on Rv1671/- |
| Rv3186/- | (cc=0.488) | info on Rv3186/- |
| Rv1132/- | (cc=0.4547) | info on Rv1132/- |
| Rv0402c/mmpL1 | (cc=0.4235) | info on Rv0402c/mmpL1 |
| Rv3478/PPE60 | (cc=0.4126) | info on Rv3478/PPE60 |
| Rv0546c/- | (cc=0.409) | info on Rv0546c/- |
| Rv3479/- | (cc=0.4053) | info on Rv3479/- |
| Rv0743c/- | (cc=0.4037) | info on Rv0743c/- |
| Rv1965/yrbE3B | (cc=0.3997) | info on Rv1965/yrbE3B |
Correlation of Rv1431/- with Rv3478/PPE60
Normalized LFCs for Rv1431/-:
(description and provenance of datasets)
| Rv1431/- | Rv3478/PPE60 | |
| Fe_supp_jason_reseq | 1.705 | -0.627 |
| low_pH_jason_reseq | -0.413 | -0.31 |
| NO_jason_reseq | 0.646 | -0.509 |
| B6_jason_reseq | 1.166 | -0.499 |
| MHCII_jason_reseq | 0.675 | -0.12 |
| Isoniazid02 | 0.195 | 0.259 |
| Rifampicin4 | 0.257 | 0.301 |
| Ethambutol3 | 0.311 | 0.637 |
| Meropenem3 | -0.086 | -0.805 |
| Vancomycin16 | 0.584 | -0.738 |
| Rv2680_day32 | -0.045 | 1.156 |
| H37Rv_KO_MarP | -0.394 | 0.94 |
| hypoxia_3wks | 0.526 | -0.658 |
| hypoxia_6wks | 0.844 | -0.921 |
| glycerol | -0.015 | -1.76 |
| cholesterol | -1.049 | -1.858 |
| AJ | -0.052 | 0.096 |
| Bibs02 | 0.264 | -0.326 |
| Bibs02c | 1.147 | -0.577 |
| BL6 | -0.009 | -0.581 |
| BL6a | 0.829 | -0.561 |
| BXD01 | 0.323 | -0.462 |
| BXD010 | 0.368 | -0.15 |
| BXD011 | 0.366 | -0.452 |
| BXD03 | -0.168 | -1.083 |
| BXD04 | 0.17 | -0.275 |
| BXD05 | -0.225 | -0.065 |
| BXD06 | -0.212 | -0.698 |
| BXD07 | 0.444 | -0.392 |
| BXD08 | 0.029 | -0.414 |
| BXD09 | -0.118 | -1.048 |
| CAST | 0.132 | 0.048 |
| CCcont | 0.176 | 0.008 |
| DS01 | 0.086 | -0.802 |
| DS02 | -0.254 | -0.011 |
| DS04 | -0.593 | -0.346 |
| DS0c | 0.031 | -0.57 |
| GP01 | -0.2 | 0.232 |
| GP02 | -1.039 | -1.328 |
| GP0c | -0.797 | -1.284 |
| NOD | 0.081 | 0.911 |
| NZO | -0.201 | 0.182 |
| PWK | 0.257 | 0.206 |
| H37Rv_KO_CtpC | 0.127 | -0.472 |
| H37Rv_KO_CtpD | 0.174 | -1.876 |
| H37Rv_KO_Rv1272 | 0.583 | -0.269 |
| H37Rv_KO_SugABC | 0.036 | -0.099 |
| H37Rv_KO_MbtN | 0.446 | -0.243 |
| Trans05 | -0.521 | 0.823 |
| macrophage_unactivated | 0.095 | -1.054 |
| IL1 | -0.377 | -0.243 |
| Rapamycin | -0.856 | -0.252 |
| Tcell | -0.238 | -0.13 |
| GMCSF | -0.164 | -1.302 |
| IFNab | -0.284 | -0.441 |
| IFNg | -0.251 | -0.604 |
| IFNg_GMCSF1 | -0.471 | -0.459 |
| Rv1432_day32 | 5.473 | 2.139 |
| Rv1565c_day32 | 0.087 | 0.055 |
| secA2_input | 0.219 | 0.05 |
| delta_Rv3594 | 0.676 | 0.162 |
| delta_Rv3717 | 0.653 | 0.258 |
| delta_Rv3811 | 0.88 | -0.399 |
| delta_Rv0954 | 0.308 | 0.567 |
| PonA1 | 0.12 | 0.92 |
| EccD1_KO | 0.654 | 0.799 |
| EspI_KO | 0.867 | 0.77 |
| PE35_KO | 1.21 | 1.047 |
| PPE68_KO | 1.414 | 0.893 |
| glycerol2 | -0.279 | -0.517 |
| lignocerate | -0.077 | 0.141 |
| oleate | 0.037 | -0.164 |
| phosphatidylcholine | 0.403 | 1.605 |
| acetate | -0.105 | -0.574 |
| glucAc | 1.56 | -0.595 |
| Rv0950ko | 0.241 | -0.467 |
| Rv1096ko | -0.169 | -0.253 |
| Rv3684ko | 0.134 | -0.478 |
| delta_otsA_trehalose | -0.105 | -1.319 |