Top 10 genes with highest correlation to Rv1431/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1522c/mmpL12 | (cc=0.5518) | info on Rv1522c/mmpL12 |
| Rv1671/- | (cc=0.5125) | info on Rv1671/- |
| Rv3186/- | (cc=0.488) | info on Rv3186/- |
| Rv1132/- | (cc=0.4547) | info on Rv1132/- |
| Rv0402c/mmpL1 | (cc=0.4235) | info on Rv0402c/mmpL1 |
| Rv3478/PPE60 | (cc=0.4126) | info on Rv3478/PPE60 |
| Rv0546c/- | (cc=0.409) | info on Rv0546c/- |
| Rv3479/- | (cc=0.4053) | info on Rv3479/- |
| Rv0743c/- | (cc=0.4037) | info on Rv0743c/- |
| Rv1965/yrbE3B | (cc=0.3997) | info on Rv1965/yrbE3B |
Correlation of Rv1431/- with Rv1671/-
Normalized LFCs for Rv1431/-:
(description and provenance of datasets)
| Rv1431/- | Rv1671/- | |
| Fe_supp_jason_reseq | 1.705 | 0.368 |
| low_pH_jason_reseq | -0.413 | -0.738 |
| NO_jason_reseq | 0.646 | 0.557 |
| B6_jason_reseq | 1.166 | -0.21 |
| MHCII_jason_reseq | 0.675 | 0.613 |
| Isoniazid02 | 0.195 | 0.224 |
| Rifampicin4 | 0.257 | -0.089 |
| Ethambutol3 | 0.311 | 1.385 |
| Meropenem3 | -0.086 | -0.343 |
| Vancomycin16 | 0.584 | 0.085 |
| Rv2680_day32 | -0.045 | 0.07 |
| H37Rv_KO_MarP | -0.394 | 0.099 |
| hypoxia_3wks | 0.526 | -0.355 |
| hypoxia_6wks | 0.844 | -0.487 |
| glycerol | -0.015 | -0.32 |
| cholesterol | -1.049 | -0.149 |
| AJ | -0.052 | -0.116 |
| Bibs02 | 0.264 | -0.397 |
| Bibs02c | 1.147 | 0.376 |
| BL6 | -0.009 | 0.099 |
| BL6a | 0.829 | 0.329 |
| BXD01 | 0.323 | -0.257 |
| BXD010 | 0.368 | 1.104 |
| BXD011 | 0.366 | 0.061 |
| BXD03 | -0.168 | -0.562 |
| BXD04 | 0.17 | 0.288 |
| BXD05 | -0.225 | 0.67 |
| BXD06 | -0.212 | -0.372 |
| BXD07 | 0.444 | 0.66 |
| BXD08 | 0.029 | -0.09 |
| BXD09 | -0.118 | 0.501 |
| CAST | 0.132 | 0.073 |
| CCcont | 0.176 | -0.294 |
| DS01 | 0.086 | 0.0 |
| DS02 | -0.254 | 0.268 |
| DS04 | -0.593 | 0.122 |
| DS0c | 0.031 | -0.108 |
| GP01 | -0.2 | -0.653 |
| GP02 | -1.039 | -1.386 |
| GP0c | -0.797 | -0.541 |
| NOD | 0.081 | -0.151 |
| NZO | -0.201 | -0.205 |
| PWK | 0.257 | -0.033 |
| H37Rv_KO_CtpC | 0.127 | 0.74 |
| H37Rv_KO_CtpD | 0.174 | 0.729 |
| H37Rv_KO_Rv1272 | 0.583 | 1.466 |
| H37Rv_KO_SugABC | 0.036 | -1.502 |
| H37Rv_KO_MbtN | 0.446 | 1.126 |
| Trans05 | -0.521 | 0.355 |
| macrophage_unactivated | 0.095 | 0.139 |
| IL1 | -0.377 | -0.78 |
| Rapamycin | -0.856 | -1.154 |
| Tcell | -0.238 | -1.225 |
| GMCSF | -0.164 | -0.465 |
| IFNab | -0.284 | -0.139 |
| IFNg | -0.251 | -0.802 |
| IFNg_GMCSF1 | -0.471 | 0.047 |
| Rv1432_day32 | 5.473 | 1.671 |
| Rv1565c_day32 | 0.087 | 0.256 |
| secA2_input | 0.219 | 0.081 |
| delta_Rv3594 | 0.676 | 0.788 |
| delta_Rv3717 | 0.653 | 0.367 |
| delta_Rv3811 | 0.88 | 1.051 |
| delta_Rv0954 | 0.308 | 0.611 |
| PonA1 | 0.12 | 0.0 |
| EccD1_KO | 0.654 | 0.895 |
| EspI_KO | 0.867 | -0.157 |
| PE35_KO | 1.21 | 1.986 |
| PPE68_KO | 1.414 | 2.742 |
| glycerol2 | -0.279 | -0.531 |
| lignocerate | -0.077 | -0.325 |
| oleate | 0.037 | -0.163 |
| phosphatidylcholine | 0.403 | -0.265 |
| acetate | -0.105 | -0.63 |
| glucAc | 1.56 | -0.362 |
| Rv0950ko | 0.241 | -0.908 |
| Rv1096ko | -0.169 | -1.233 |
| Rv3684ko | 0.134 | -1.569 |
| delta_otsA_trehalose | -0.105 | -1.057 |