Top 10 genes with highest correlation to Rv1391/dfp:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2475c/- | (cc=0.4609) | info on Rv2475c/- |
| Rv0464c/- | (cc=0.4539) | info on Rv0464c/- |
| Rv1282c/oppC | (cc=0.4463) | info on Rv1282c/oppC |
| Rv1448c/tal | (cc=0.4331) | info on Rv1448c/tal |
| Rv1538c/ansA | (cc=0.4206) | info on Rv1538c/ansA |
| Rv2469c/- | (cc=0.4125) | info on Rv2469c/- |
| Rv0391/metZ | (cc=0.4101) | info on Rv0391/metZ |
| Rv1852/ureG | (cc=0.4094) | info on Rv1852/ureG |
| Rv1465/- | (cc=0.4093) | info on Rv1465/- |
| Rv3416/whiB3 | (cc=0.4038) | info on Rv3416/whiB3 |
Correlation of Rv1391/dfp with Rv2469c/-
Normalized LFCs for Rv1391/dfp:
(description and provenance of datasets)
| Rv1391/dfp | Rv2469c/- | |
| Fe_supp_jason_reseq | -1.228 | -1.754 |
| low_pH_jason_reseq | 0.617 | -0.283 |
| NO_jason_reseq | -0.331 | -0.483 |
| B6_jason_reseq | -0.863 | -0.496 |
| MHCII_jason_reseq | -0.977 | -1.579 |
| Isoniazid02 | 0.268 | -0.556 |
| Rifampicin4 | -0.181 | -0.108 |
| Ethambutol3 | -0.258 | -0.049 |
| Meropenem3 | -0.165 | -0.116 |
| Vancomycin16 | 0.17 | -0.191 |
| Rv2680_day32 | 0.0 | 0.118 |
| H37Rv_KO_MarP | 0.715 | 0.08 |
| hypoxia_3wks | 0.0 | 0.175 |
| hypoxia_6wks | -0.503 | 0.284 |
| glycerol | -1.355 | 0.117 |
| cholesterol | -0.696 | 0.076 |
| AJ | 0.0 | -0.538 |
| Bibs02 | 0.281 | -0.171 |
| Bibs02c | -0.829 | -0.564 |
| BL6 | -0.145 | 1.177 |
| BL6a | 0.0 | 0.244 |
| BXD01 | -0.744 | -0.236 |
| BXD010 | -0.859 | -0.078 |
| BXD011 | -0.612 | 0.949 |
| BXD03 | -0.907 | -0.144 |
| BXD04 | -0.143 | 0.464 |
| BXD05 | -0.533 | 1.105 |
| BXD06 | -0.33 | 0.507 |
| BXD07 | 0.0 | 1.259 |
| BXD08 | -0.239 | 0.031 |
| BXD09 | -0.557 | 0.238 |
| CAST | -0.569 | -0.14 |
| CCcont | -0.268 | 0.362 |
| DS01 | -0.424 | -0.298 |
| DS02 | -0.862 | -0.175 |
| DS04 | -0.769 | 0.461 |
| DS0c | -0.123 | -0.025 |
| GP01 | -0.662 | 0.253 |
| GP02 | -0.558 | 0.019 |
| GP0c | -0.872 | 0.738 |
| NOD | -0.89 | 0.347 |
| NZO | -0.358 | -0.11 |
| PWK | -1.12 | -0.384 |
| H37Rv_KO_CtpC | 0.087 | 0.643 |
| H37Rv_KO_CtpD | -0.85 | 0.234 |
| H37Rv_KO_Rv1272 | -0.163 | 0.288 |
| H37Rv_KO_SugABC | -0.664 | 0.006 |
| H37Rv_KO_MbtN | -0.495 | 1.011 |
| Trans05 | 0.07 | 0.0 |
| macrophage_unactivated | -0.259 | 0.063 |
| IL1 | 0.451 | 0.626 |
| Rapamycin | -1.114 | 0.506 |
| Tcell | -0.554 | 0.228 |
| GMCSF | -1.545 | -0.539 |
| IFNab | -0.248 | 0.169 |
| IFNg | -0.219 | 0.692 |
| IFNg_GMCSF1 | 0.0 | -0.016 |
| Rv1432_day32 | -1.635 | -0.24 |
| Rv1565c_day32 | 0.0 | -0.749 |
| secA2_input | 0.0 | -0.095 |
| delta_Rv3594 | -0.295 | 0.618 |
| delta_Rv3717 | -0.243 | 1.238 |
| delta_Rv3811 | -1.008 | 0.402 |
| delta_Rv0954 | 0.976 | 1.735 |
| PonA1 | 0.0 | -0.114 |
| EccD1_KO | 0.431 | 0.536 |
| EspI_KO | -0.2 | 0.901 |
| PE35_KO | 0.0 | -0.563 |
| PPE68_KO | 0.985 | 0.205 |
| glycerol2 | 0.0 | 0.775 |
| lignocerate | 0.0 | 0.097 |
| oleate | 0.0 | 1.021 |
| phosphatidylcholine | 0.0 | 0.658 |
| acetate | 0.229 | 0.527 |
| glucAc | 0.272 | 0.036 |
| Rv0950ko | -0.202 | 1.125 |
| Rv1096ko | 0.193 | 0.374 |
| Rv3684ko | 0.21 | 0.622 |
| delta_otsA_trehalose | 1.929 | 2.237 |