Top 10 genes with highest correlation to Rv1391/dfp:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2475c/- | (cc=0.4609) | info on Rv2475c/- |
| Rv0464c/- | (cc=0.4539) | info on Rv0464c/- |
| Rv1282c/oppC | (cc=0.4463) | info on Rv1282c/oppC |
| Rv1448c/tal | (cc=0.4331) | info on Rv1448c/tal |
| Rv1538c/ansA | (cc=0.4206) | info on Rv1538c/ansA |
| Rv2469c/- | (cc=0.4125) | info on Rv2469c/- |
| Rv0391/metZ | (cc=0.4101) | info on Rv0391/metZ |
| Rv1852/ureG | (cc=0.4094) | info on Rv1852/ureG |
| Rv1465/- | (cc=0.4093) | info on Rv1465/- |
| Rv3416/whiB3 | (cc=0.4038) | info on Rv3416/whiB3 |
Correlation of Rv1391/dfp with Rv2475c/-
Normalized LFCs for Rv1391/dfp:
(description and provenance of datasets)
| Rv1391/dfp | Rv2475c/- | |
| Fe_supp_jason_reseq | -1.228 | -0.982 |
| low_pH_jason_reseq | 0.617 | 0.283 |
| NO_jason_reseq | -0.331 | -5.224 |
| B6_jason_reseq | -0.863 | -3.595 |
| MHCII_jason_reseq | -0.977 | -1.986 |
| Isoniazid02 | 0.268 | -0.611 |
| Rifampicin4 | -0.181 | -0.707 |
| Ethambutol3 | -0.258 | -1.53 |
| Meropenem3 | -0.165 | -2.11 |
| Vancomycin16 | 0.17 | -0.743 |
| Rv2680_day32 | 0.0 | -3.788 |
| H37Rv_KO_MarP | 0.715 | 0.442 |
| hypoxia_3wks | 0.0 | 0.335 |
| hypoxia_6wks | -0.503 | -0.382 |
| glycerol | -1.355 | -2.036 |
| cholesterol | -0.696 | -0.89 |
| AJ | 0.0 | -2.588 |
| Bibs02 | 0.281 | -0.715 |
| Bibs02c | -0.829 | -2.236 |
| BL6 | -0.145 | -0.885 |
| BL6a | 0.0 | -1.832 |
| BXD01 | -0.744 | -0.607 |
| BXD010 | -0.859 | -0.688 |
| BXD011 | -0.612 | -1.797 |
| BXD03 | -0.907 | -1.197 |
| BXD04 | -0.143 | 0.047 |
| BXD05 | -0.533 | -1.545 |
| BXD06 | -0.33 | -1.386 |
| BXD07 | 0.0 | -0.921 |
| BXD08 | -0.239 | -1.794 |
| BXD09 | -0.557 | -1.281 |
| CAST | -0.569 | -1.758 |
| CCcont | -0.268 | 0.752 |
| DS01 | -0.424 | -2.152 |
| DS02 | -0.862 | -1.763 |
| DS04 | -0.769 | -2.195 |
| DS0c | -0.123 | -2.065 |
| GP01 | -0.662 | -0.732 |
| GP02 | -0.558 | -1.911 |
| GP0c | -0.872 | -1.151 |
| NOD | -0.89 | -3.267 |
| NZO | -0.358 | -2.323 |
| PWK | -1.12 | -1.867 |
| H37Rv_KO_CtpC | 0.087 | -1.736 |
| H37Rv_KO_CtpD | -0.85 | -1.012 |
| H37Rv_KO_Rv1272 | -0.163 | -0.998 |
| H37Rv_KO_SugABC | -0.664 | -1.485 |
| H37Rv_KO_MbtN | -0.495 | 1.143 |
| Trans05 | 0.07 | -1.762 |
| macrophage_unactivated | -0.259 | 0.36 |
| IL1 | 0.451 | -0.489 |
| Rapamycin | -1.114 | 0.497 |
| Tcell | -0.554 | -0.733 |
| GMCSF | -1.545 | -1.927 |
| IFNab | -0.248 | 0.067 |
| IFNg | -0.219 | -2.403 |
| IFNg_GMCSF1 | 0.0 | -1.678 |
| Rv1432_day32 | -1.635 | -3.601 |
| Rv1565c_day32 | 0.0 | -1.148 |
| secA2_input | 0.0 | 1.331 |
| delta_Rv3594 | -0.295 | 0.054 |
| delta_Rv3717 | -0.243 | -0.497 |
| delta_Rv3811 | -1.008 | -0.345 |
| delta_Rv0954 | 0.976 | 0.176 |
| PonA1 | 0.0 | 1.432 |
| EccD1_KO | 0.431 | -0.151 |
| EspI_KO | -0.2 | 1.027 |
| PE35_KO | 0.0 | 0.683 |
| PPE68_KO | 0.985 | 0.918 |
| glycerol2 | 0.0 | 1.014 |
| lignocerate | 0.0 | 1.396 |
| oleate | 0.0 | -0.194 |
| phosphatidylcholine | 0.0 | 1.217 |
| acetate | 0.229 | 1.019 |
| glucAc | 0.272 | 0.892 |
| Rv0950ko | -0.202 | 0.799 |
| Rv1096ko | 0.193 | 0.872 |
| Rv3684ko | 0.21 | 1.32 |
| delta_otsA_trehalose | 1.929 | 0.871 |