Top 10 genes with highest correlation to Rv1349/irtB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1348/irtA | (cc=0.621) | info on Rv1348/irtA |
| Rv0470c/pcaA | (cc=0.5537) | info on Rv0470c/pcaA |
| Rv1286/cysN | (cc=0.4912) | info on Rv1286/cysN |
| Rv1285/cysD | (cc=0.4701) | info on Rv1285/cysD |
| Rv2680/- | (cc=0.4621) | info on Rv2680/- |
| Rv2334/cysK1 | (cc=0.4577) | info on Rv2334/cysK1 |
| Rv2581c/- | (cc=0.4564) | info on Rv2581c/- |
| Rv1845c/blaR | (cc=0.4542) | info on Rv1845c/blaR |
| Rv2901c/- | (cc=0.4518) | info on Rv2901c/- |
| Rv2894c/xerC | (cc=0.4446) | info on Rv2894c/xerC |
Correlation of Rv1349/irtB with Rv1845c/blaR
Normalized LFCs for Rv1349/irtB:
(description and provenance of datasets)
| Rv1349/irtB | Rv1845c/blaR | |
| Fe_supp_jason_reseq | 1.847 | 1.796 |
| low_pH_jason_reseq | 2.844 | 6.0 |
| NO_jason_reseq | -0.69 | 0.0 |
| B6_jason_reseq | -0.292 | 0.0 |
| MHCII_jason_reseq | -0.257 | 0.0 |
| Isoniazid02 | -0.201 | 0.0 |
| Rifampicin4 | -0.374 | 0.0 |
| Ethambutol3 | -0.168 | 0.0 |
| Meropenem3 | -0.165 | 0.0 |
| Vancomycin16 | -0.366 | 0.0 |
| Rv2680_day32 | -0.131 | 0.0 |
| H37Rv_KO_MarP | -0.586 | 0.961 |
| hypoxia_3wks | -0.55 | 0.0 |
| hypoxia_6wks | 0.0 | 0.0 |
| glycerol | -0.856 | 1.24 |
| cholesterol | -0.614 | 0.0 |
| AJ | -0.983 | 0.0 |
| Bibs02 | -0.273 | 0.0 |
| Bibs02c | -0.887 | 0.0 |
| BL6 | -0.53 | 0.0 |
| BL6a | -0.839 | 0.0 |
| BXD01 | -0.552 | 0.13 |
| BXD010 | -0.543 | 0.0 |
| BXD011 | -0.412 | 0.0 |
| BXD03 | -0.573 | 0.0 |
| BXD04 | -0.4 | 0.0 |
| BXD05 | -0.57 | 0.0 |
| BXD06 | -0.566 | 0.254 |
| BXD07 | -0.587 | 0.0 |
| BXD08 | -0.564 | 0.0 |
| BXD09 | -0.596 | 0.0 |
| CAST | -0.537 | 0.0 |
| CCcont | 0.196 | 0.285 |
| DS01 | 0.0 | 0.0 |
| DS02 | 1.251 | 0.217 |
| DS04 | -0.453 | 0.37 |
| DS0c | 0.0 | 0.0 |
| GP01 | -0.418 | 0.099 |
| GP02 | -0.353 | 0.0 |
| GP0c | -0.551 | 0.357 |
| NOD | -0.524 | 0.0 |
| NZO | -0.465 | 0.0 |
| PWK | -0.831 | 0.0 |
| H37Rv_KO_CtpC | -0.379 | 0.162 |
| H37Rv_KO_CtpD | -0.41 | 0.918 |
| H37Rv_KO_Rv1272 | -0.598 | 0.0 |
| H37Rv_KO_SugABC | -0.231 | 0.099 |
| H37Rv_KO_MbtN | -0.154 | 0.943 |
| Trans05 | -0.423 | 0.0 |
| macrophage_unactivated | -0.436 | 0.0 |
| IL1 | 0.374 | 0.0 |
| Rapamycin | 0.0 | 0.0 |
| Tcell | 0.0 | 0.0 |
| GMCSF | -0.364 | 0.0 |
| IFNab | -0.417 | 0.0 |
| IFNg | -0.369 | 0.0 |
| IFNg_GMCSF1 | -0.434 | 0.0 |
| Rv1432_day32 | -0.18 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -1.061 | 3.034 |
| delta_Rv3594 | -1.436 | -1.319 |
| delta_Rv3717 | -1.339 | -0.927 |
| delta_Rv3811 | -1.224 | -1.096 |
| delta_Rv0954 | -0.083 | -0.196 |
| PonA1 | 0.792 | 2.086 |
| EccD1_KO | -1.121 | 0.77 |
| EspI_KO | -0.973 | 0.667 |
| PE35_KO | 0.983 | -1.467 |
| PPE68_KO | -0.25 | -0.579 |
| glycerol2 | -1.153 | 0.0 |
| lignocerate | -1.296 | 0.0 |
| oleate | -1.704 | 0.0 |
| phosphatidylcholine | -1.153 | 0.0 |
| acetate | -1.368 | 0.0 |
| glucAc | -1.1 | 0.0 |
| Rv0950ko | -0.844 | -0.844 |
| Rv1096ko | 0.483 | -0.546 |
| Rv3684ko | -0.593 | 2.184 |
| delta_otsA_trehalose | -0.881 | -4.196 |