TnSeqCorr

Top 10 genes with highest correlation to Rv1347c/mbtK:

update plotcorrelationlink to info on gene
Rv3849/espR (cc=0.5904) info on Rv3849/espR
Rv2475c/- (cc=0.5205) info on Rv2475c/-
Rv0391/metZ (cc=0.5149) info on Rv0391/metZ
Rv3534c/hsaF (cc=0.4959) info on Rv3534c/hsaF
Rv0757/phoP (cc=0.4908) info on Rv0757/phoP
Rv2476c/gdh (cc=0.4894) info on Rv2476c/gdh
Rv2594c/ruvC (cc=0.481) info on Rv2594c/ruvC
Rv3197/- (cc=0.4778) info on Rv3197/-
Rv1331/- (cc=0.4764) info on Rv1331/-
Rv2386c/mbtI (cc=0.4756) info on Rv2386c/mbtI

Correlation of Rv1347c/mbtK with Rv0391/metZ

Normalized LFCs for Rv1347c/mbtK:
(description and provenance of datasets)
Rv1347c/mbtKRv0391/metZ
Fe_supp_jason_reseq

0.854

-1.075

low_pH_jason_reseq

0.905

-0.35

NO_jason_reseq

-0.362

-0.265

B6_jason_reseq

-0.153

-2.065

MHCII_jason_reseq

-0.135

-2.712

Isoniazid02

0.268

-1.052

Rifampicin4

-0.893

0.36

Ethambutol3

-1.569

-1.009

Meropenem3

-1.452

-1.689

Vancomycin16

-0.088

-0.512

Rv2680_day32

-0.512

-3.196

H37Rv_KO_MarP

0.735

-0.334

hypoxia_3wks

-0.502

-1.918

hypoxia_6wks

-0.263

-1.075

glycerol

-0.709

-3.065

cholesterol

-0.509

-4.165

AJ

-0.815

-1.814

Bibs02

-0.642

-2.42

Bibs02c

-0.527

-2.986

BL6

-0.439

-1.898

BL6a

-0.696

-3.204

BXD01

-0.458

-2.411

BXD010

-0.45

-1.463

BXD011

-0.448

-2.741

BXD03

-0.475

-1.376

BXD04

-0.434

-2.067

BXD05

-0.473

-1.781

BXD06

-0.469

-2.268

BXD07

-0.486

-2.809

BXD08

-0.467

-1.498

BXD09

-0.494

-2.555

CAST

-0.809

-2.75

CCcont

0.303

-1.498

DS01

-0.38

-2.236

DS02

0.0

-2.379

DS04

-0.489

-2.645

DS0c

-0.168

-2.145

GP01

-0.347

-0.581

GP02

-0.292

-0.884

GP0c

-0.457

-1.304

NOD

-0.566

-0.155

NZO

-0.701

-2.719

PWK

-0.494

-2.674

H37Rv_KO_CtpC

-0.41

-1.27

H37Rv_KO_CtpD

-0.204

-1.953

H37Rv_KO_Rv1272

-0.495

-2.755

H37Rv_KO_SugABC

-0.348

-0.382

H37Rv_KO_MbtN

-0.26

-1.286

Trans05

-0.459

-2.701

macrophage_unactivated

0.83

-0.243

IL1

0.0

1.305

Rapamycin

0.0

-0.488

Tcell

1.235

1.698

GMCSF

0.0

-1.064

IFNab

0.0

-0.523

IFNg

0.0

0.099

IFNg_GMCSF1

0.0

-1.062

Rv1432_day32

0.0

-3.707

Rv1565c_day32

0.0

-2.504

secA2_input

-0.092

0.307

delta_Rv3594

-0.635

-1.055

delta_Rv3717

0.0

-1.128

delta_Rv3811

-0.287

-1.268

delta_Rv0954

-0.536

-0.491

PonA1

1.35

0.465

EccD1_KO

-0.664

0.0

EspI_KO

0.659

-0.588

PE35_KO

0.674

-0.715

PPE68_KO

0.384

-0.221

glycerol2

-0.177

0.422

lignocerate

0.0

-0.044

oleate

0.0

-0.129

phosphatidylcholine

0.0

-0.076

acetate

1.225

-0.09

glucAc

0.0

-0.623

Rv0950ko

0.639

0.157

Rv1096ko

0.639

0.422

Rv3684ko

1.104

-0.458

delta_otsA_trehalose

1.515

0.161