Top 10 genes with highest correlation to Rv1337/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.8102) | info on Rv1336/cysM |
| Rv1333/- | (cc=0.8027) | info on Rv1333/- |
| Rv1334/mec | (cc=0.7723) | info on Rv1334/mec |
| Rv1335/cysO | (cc=0.7146) | info on Rv1335/cysO |
| Rv3036c/TB22.2 | (cc=0.7093) | info on Rv3036c/TB22.2 |
| Rv1211/- | (cc=0.6764) | info on Rv1211/- |
| Rv0047c/- | (cc=0.6275) | info on Rv0047c/- |
| Rv0019c/fhaB | (cc=0.6273) | info on Rv0019c/fhaB |
| Rv3842c/glpQ1 | (cc=0.6263) | info on Rv3842c/glpQ1 |
| Rv0545c/pitA | (cc=0.6172) | info on Rv0545c/pitA |
Correlation of Rv1337/- with Rv3842c/glpQ1
Normalized LFCs for Rv1337/-:
(description and provenance of datasets)
| Rv1337/- | Rv3842c/glpQ1 | |
| Fe_supp_jason_reseq | -0.161 | -2.242 |
| low_pH_jason_reseq | 0.703 | 0.574 |
| NO_jason_reseq | 2.318 | 3.631 |
| B6_jason_reseq | -1.801 | 1.38 |
| MHCII_jason_reseq | -2.508 | -0.853 |
| Isoniazid02 | -0.07 | 0.288 |
| Rifampicin4 | 0.406 | -0.33 |
| Ethambutol3 | -0.5 | 2.837 |
| Meropenem3 | 1.32 | -0.259 |
| Vancomycin16 | 1.043 | 0.146 |
| Rv2680_day32 | -1.037 | 1.647 |
| H37Rv_KO_MarP | -2.441 | -1.617 |
| hypoxia_3wks | 1.392 | -1.519 |
| hypoxia_6wks | 2.915 | 1.675 |
| glycerol | 0.415 | 0.016 |
| cholesterol | 0.0 | -0.252 |
| AJ | -2.513 | 0.528 |
| Bibs02 | -2.162 | -0.551 |
| Bibs02c | -2.367 | -1.51 |
| BL6 | 0.701 | 1.67 |
| BL6a | 0.578 | 2.716 |
| BXD01 | 1.969 | 3.451 |
| BXD010 | 2.132 | 2.506 |
| BXD011 | 3.388 | 4.887 |
| BXD03 | 0.939 | 1.946 |
| BXD04 | 1.697 | 3.768 |
| BXD05 | 1.871 | 2.897 |
| BXD06 | 1.658 | 3.915 |
| BXD07 | 1.934 | 3.764 |
| BXD08 | 1.855 | 3.535 |
| BXD09 | 1.712 | 3.421 |
| CAST | -3.187 | 1.655 |
| CCcont | 1.179 | -0.279 |
| DS01 | -3.343 | -2.566 |
| DS02 | -2.811 | -3.052 |
| DS04 | -0.457 | -0.749 |
| DS0c | -2.564 | -1.941 |
| GP01 | 0.863 | 3.019 |
| GP02 | 1.125 | 2.711 |
| GP0c | 2.274 | 3.642 |
| NOD | -1.744 | 0.085 |
| NZO | -1.048 | 1.361 |
| PWK | -1.421 | 3.319 |
| H37Rv_KO_CtpC | -0.128 | -0.514 |
| H37Rv_KO_CtpD | 0.747 | 0.058 |
| H37Rv_KO_Rv1272 | 1.141 | 0.94 |
| H37Rv_KO_SugABC | 2.529 | 1.215 |
| H37Rv_KO_MbtN | 2.805 | 2.418 |
| Trans05 | 1.849 | 1.7 |
| macrophage_unactivated | -1.395 | -3.043 |
| IL1 | 1.344 | 0.409 |
| Rapamycin | 0.153 | -0.497 |
| Tcell | -0.384 | 0.378 |
| GMCSF | -1.286 | -2.764 |
| IFNab | 0.62 | -0.327 |
| IFNg | 1.229 | -1.139 |
| IFNg_GMCSF1 | -0.547 | -1.339 |
| Rv1432_day32 | 1.108 | 3.437 |
| Rv1565c_day32 | -1.428 | -3.047 |
| secA2_input | -0.216 | 0.528 |
| delta_Rv3594 | 1.64 | 0.229 |
| delta_Rv3717 | 3.154 | 2.504 |
| delta_Rv3811 | 1.901 | 1.028 |
| delta_Rv0954 | 0.093 | -2.01 |
| PonA1 | -0.688 | -2.098 |
| EccD1_KO | -1.618 | -1.687 |
| EspI_KO | -0.625 | -1.928 |
| PE35_KO | -1.607 | -2.091 |
| PPE68_KO | -1.299 | -2.278 |
| glycerol2 | 0.105 | 0.205 |
| lignocerate | -2.007 | -1.063 |
| oleate | 2.057 | -0.284 |
| phosphatidylcholine | -2.241 | -0.633 |
| acetate | 0.1 | -0.372 |
| glucAc | -0.357 | -0.425 |
| Rv0950ko | -0.615 | -1.08 |
| Rv1096ko | -0.09 | -0.935 |
| Rv3684ko | 0.16 | 0.521 |
| delta_otsA_trehalose | 0.625 | 0.282 |