Top 10 genes with highest correlation to Rv1337/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.8102) | info on Rv1336/cysM |
| Rv1333/- | (cc=0.8027) | info on Rv1333/- |
| Rv1334/mec | (cc=0.7723) | info on Rv1334/mec |
| Rv1335/cysO | (cc=0.7146) | info on Rv1335/cysO |
| Rv3036c/TB22.2 | (cc=0.7093) | info on Rv3036c/TB22.2 |
| Rv1211/- | (cc=0.6764) | info on Rv1211/- |
| Rv0047c/- | (cc=0.6275) | info on Rv0047c/- |
| Rv0019c/fhaB | (cc=0.6273) | info on Rv0019c/fhaB |
| Rv3842c/glpQ1 | (cc=0.6263) | info on Rv3842c/glpQ1 |
| Rv0545c/pitA | (cc=0.6172) | info on Rv0545c/pitA |
Correlation of Rv1337/- with Rv1333/-
Normalized LFCs for Rv1337/-:
(description and provenance of datasets)
| Rv1337/- | Rv1333/- | |
| Fe_supp_jason_reseq | -0.161 | 0.259 |
| low_pH_jason_reseq | 0.703 | 0.161 |
| NO_jason_reseq | 2.318 | 0.819 |
| B6_jason_reseq | -1.801 | -0.371 |
| MHCII_jason_reseq | -2.508 | 0.363 |
| Isoniazid02 | -0.07 | -0.631 |
| Rifampicin4 | 0.406 | 1.032 |
| Ethambutol3 | -0.5 | -1.364 |
| Meropenem3 | 1.32 | -0.654 |
| Vancomycin16 | 1.043 | 0.531 |
| Rv2680_day32 | -1.037 | 0.36 |
| H37Rv_KO_MarP | -2.441 | -0.557 |
| hypoxia_3wks | 1.392 | 0.941 |
| hypoxia_6wks | 2.915 | 1.351 |
| glycerol | 0.415 | -0.718 |
| cholesterol | 0.0 | 0.574 |
| AJ | -2.513 | -1.375 |
| Bibs02 | -2.162 | -0.898 |
| Bibs02c | -2.367 | -0.153 |
| BL6 | 0.701 | 0.9 |
| BL6a | 0.578 | 0.865 |
| BXD01 | 1.969 | 1.833 |
| BXD010 | 2.132 | 1.317 |
| BXD011 | 3.388 | 1.36 |
| BXD03 | 0.939 | 1.786 |
| BXD04 | 1.697 | 1.307 |
| BXD05 | 1.871 | 1.887 |
| BXD06 | 1.658 | 1.352 |
| BXD07 | 1.934 | 1.468 |
| BXD08 | 1.855 | 1.477 |
| BXD09 | 1.712 | 1.215 |
| CAST | -3.187 | -1.094 |
| CCcont | 1.179 | 1.089 |
| DS01 | -3.343 | -0.775 |
| DS02 | -2.811 | -0.654 |
| DS04 | -0.457 | -0.121 |
| DS0c | -2.564 | -0.624 |
| GP01 | 0.863 | 1.29 |
| GP02 | 1.125 | 0.762 |
| GP0c | 2.274 | 1.388 |
| NOD | -1.744 | -1.865 |
| NZO | -1.048 | -0.189 |
| PWK | -1.421 | -0.871 |
| H37Rv_KO_CtpC | -0.128 | -0.578 |
| H37Rv_KO_CtpD | 0.747 | 0.336 |
| H37Rv_KO_Rv1272 | 1.141 | 1.244 |
| H37Rv_KO_SugABC | 2.529 | 1.968 |
| H37Rv_KO_MbtN | 2.805 | 1.498 |
| Trans05 | 1.849 | 0.051 |
| macrophage_unactivated | -1.395 | -0.492 |
| IL1 | 1.344 | 0.596 |
| Rapamycin | 0.153 | 0.853 |
| Tcell | -0.384 | 0.688 |
| GMCSF | -1.286 | -0.565 |
| IFNab | 0.62 | 0.441 |
| IFNg | 1.229 | 0.334 |
| IFNg_GMCSF1 | -0.547 | 0.157 |
| Rv1432_day32 | 1.108 | 0.595 |
| Rv1565c_day32 | -1.428 | -0.753 |
| secA2_input | -0.216 | 0.083 |
| delta_Rv3594 | 1.64 | 0.971 |
| delta_Rv3717 | 3.154 | 1.592 |
| delta_Rv3811 | 1.901 | 0.708 |
| delta_Rv0954 | 0.093 | -0.548 |
| PonA1 | -0.688 | -0.517 |
| EccD1_KO | -1.618 | -0.895 |
| EspI_KO | -0.625 | -0.804 |
| PE35_KO | -1.607 | -1.304 |
| PPE68_KO | -1.299 | -0.969 |
| glycerol2 | 0.105 | -0.184 |
| lignocerate | -2.007 | -0.728 |
| oleate | 2.057 | 2.294 |
| phosphatidylcholine | -2.241 | -0.541 |
| acetate | 0.1 | -0.288 |
| glucAc | -0.357 | 0.446 |
| Rv0950ko | -0.615 | -0.413 |
| Rv1096ko | -0.09 | 0.054 |
| Rv3684ko | 0.16 | -0.481 |
| delta_otsA_trehalose | 0.625 | 0.747 |