Top 10 genes with highest correlation to Rv1337/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.8102) | info on Rv1336/cysM |
| Rv1333/- | (cc=0.8027) | info on Rv1333/- |
| Rv1334/mec | (cc=0.7723) | info on Rv1334/mec |
| Rv1335/cysO | (cc=0.7146) | info on Rv1335/cysO |
| Rv3036c/TB22.2 | (cc=0.7093) | info on Rv3036c/TB22.2 |
| Rv1211/- | (cc=0.6764) | info on Rv1211/- |
| Rv0047c/- | (cc=0.6275) | info on Rv0047c/- |
| Rv0019c/fhaB | (cc=0.6273) | info on Rv0019c/fhaB |
| Rv3842c/glpQ1 | (cc=0.6263) | info on Rv3842c/glpQ1 |
| Rv0545c/pitA | (cc=0.6172) | info on Rv0545c/pitA |
Correlation of Rv1337/- with Rv0047c/-
Normalized LFCs for Rv1337/-:
(description and provenance of datasets)
| Rv1337/- | Rv0047c/- | |
| Fe_supp_jason_reseq | -0.161 | -2.182 |
| low_pH_jason_reseq | 0.703 | 3.995 |
| NO_jason_reseq | 2.318 | 4.009 |
| B6_jason_reseq | -1.801 | 1.375 |
| MHCII_jason_reseq | -2.508 | -1.004 |
| Isoniazid02 | -0.07 | -0.469 |
| Rifampicin4 | 0.406 | -1.519 |
| Ethambutol3 | -0.5 | 2.698 |
| Meropenem3 | 1.32 | -2.017 |
| Vancomycin16 | 1.043 | -0.854 |
| Rv2680_day32 | -1.037 | -1.555 |
| H37Rv_KO_MarP | -2.441 | -2.135 |
| hypoxia_3wks | 1.392 | -2.153 |
| hypoxia_6wks | 2.915 | 2.742 |
| glycerol | 0.415 | -1.292 |
| cholesterol | 0.0 | -3.05 |
| AJ | -2.513 | 0.064 |
| Bibs02 | -2.162 | -3.399 |
| Bibs02c | -2.367 | -4.636 |
| BL6 | 0.701 | 0.41 |
| BL6a | 0.578 | 0.393 |
| BXD01 | 1.969 | 2.796 |
| BXD010 | 2.132 | 1.211 |
| BXD011 | 3.388 | 4.624 |
| BXD03 | 0.939 | 0.258 |
| BXD04 | 1.697 | 1.291 |
| BXD05 | 1.871 | 2.518 |
| BXD06 | 1.658 | 2.981 |
| BXD07 | 1.934 | 2.316 |
| BXD08 | 1.855 | 3.78 |
| BXD09 | 1.712 | 1.297 |
| CAST | -3.187 | 0.205 |
| CCcont | 1.179 | -0.493 |
| DS01 | -3.343 | -5.234 |
| DS02 | -2.811 | -4.819 |
| DS04 | -0.457 | -2.339 |
| DS0c | -2.564 | -2.461 |
| GP01 | 0.863 | 3.121 |
| GP02 | 1.125 | 0.487 |
| GP0c | 2.274 | 2.218 |
| NOD | -1.744 | -2.125 |
| NZO | -1.048 | 0.558 |
| PWK | -1.421 | 2.998 |
| H37Rv_KO_CtpC | -0.128 | -2.455 |
| H37Rv_KO_CtpD | 0.747 | 0.102 |
| H37Rv_KO_Rv1272 | 1.141 | -0.797 |
| H37Rv_KO_SugABC | 2.529 | 2.067 |
| H37Rv_KO_MbtN | 2.805 | 2.182 |
| Trans05 | 1.849 | 0.836 |
| macrophage_unactivated | -1.395 | -4.129 |
| IL1 | 1.344 | 0.163 |
| Rapamycin | 0.153 | -2.403 |
| Tcell | -0.384 | 0.603 |
| GMCSF | -1.286 | -3.501 |
| IFNab | 0.62 | -1.294 |
| IFNg | 1.229 | -1.849 |
| IFNg_GMCSF1 | -0.547 | -2.24 |
| Rv1432_day32 | 1.108 | -0.013 |
| Rv1565c_day32 | -1.428 | -4.786 |
| secA2_input | -0.216 | 0.504 |
| delta_Rv3594 | 1.64 | -0.399 |
| delta_Rv3717 | 3.154 | 1.969 |
| delta_Rv3811 | 1.901 | 0.419 |
| delta_Rv0954 | 0.093 | -0.37 |
| PonA1 | -0.688 | -1.716 |
| EccD1_KO | -1.618 | -1.227 |
| EspI_KO | -0.625 | -0.824 |
| PE35_KO | -1.607 | -1.855 |
| PPE68_KO | -1.299 | -1.952 |
| glycerol2 | 0.105 | 1.351 |
| lignocerate | -2.007 | -1.002 |
| oleate | 2.057 | 0.543 |
| phosphatidylcholine | -2.241 | 0.011 |
| acetate | 0.1 | -0.69 |
| glucAc | -0.357 | -1.622 |
| Rv0950ko | -0.615 | -0.675 |
| Rv1096ko | -0.09 | -1.137 |
| Rv3684ko | 0.16 | 2.315 |
| delta_otsA_trehalose | 0.625 | -1.257 |