Top 10 genes with highest correlation to Rv1317c/alkA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1368/lprF | (cc=0.4752) | info on Rv1368/lprF |
| Rv2394/ggtB | (cc=0.471) | info on Rv2394/ggtB |
| Rv1290c/- | (cc=0.4682) | info on Rv1290c/- |
| Rv2484c/- | (cc=0.4676) | info on Rv2484c/- |
| Rv2715/- | (cc=0.4611) | info on Rv2715/- |
| Rv2701c/suhB | (cc=0.4335) | info on Rv2701c/suhB |
| Rv0338c/- | (cc=0.4296) | info on Rv0338c/- |
| Rv0069c/sdaA | (cc=0.4268) | info on Rv0069c/sdaA |
| Rv2189c/- | (cc=0.4138) | info on Rv2189c/- |
| Rv0484c/- | (cc=0.4084) | info on Rv0484c/- |
Correlation of Rv1317c/alkA with Rv2701c/suhB
Normalized LFCs for Rv1317c/alkA:
(description and provenance of datasets)
| Rv1317c/alkA | Rv2701c/suhB | |
| Fe_supp_jason_reseq | -0.628 | -1.904 |
| low_pH_jason_reseq | -1.337 | -1.004 |
| NO_jason_reseq | -0.711 | -0.163 |
| B6_jason_reseq | -0.498 | -0.536 |
| MHCII_jason_reseq | -0.365 | -0.453 |
| Isoniazid02 | 1.264 | 0.26 |
| Rifampicin4 | 0.062 | 0.322 |
| Ethambutol3 | 1.267 | 0.946 |
| Meropenem3 | 0.236 | 1.804 |
| Vancomycin16 | 0.297 | 0.34 |
| Rv2680_day32 | 0.21 | -0.475 |
| H37Rv_KO_MarP | 0.353 | -0.134 |
| hypoxia_3wks | 0.132 | -0.722 |
| hypoxia_6wks | 0.086 | -0.284 |
| glycerol | -0.377 | 0.325 |
| cholesterol | 1.811 | 1.235 |
| AJ | -0.281 | -0.141 |
| Bibs02 | -0.342 | 0.23 |
| Bibs02c | 0.867 | 0.105 |
| BL6 | -0.792 | 0.31 |
| BL6a | 0.423 | -0.433 |
| BXD01 | -0.77 | -1.354 |
| BXD010 | -0.141 | -0.149 |
| BXD011 | -0.328 | -0.959 |
| BXD03 | -0.599 | -0.57 |
| BXD04 | -0.156 | -0.37 |
| BXD05 | -0.677 | -0.727 |
| BXD06 | 0.156 | -0.571 |
| BXD07 | -0.259 | 0.14 |
| BXD08 | 0.103 | -0.65 |
| BXD09 | -0.458 | -0.816 |
| CAST | -0.47 | 0.499 |
| CCcont | -0.973 | -1.223 |
| DS01 | -0.4 | -0.448 |
| DS02 | -0.917 | -0.413 |
| DS04 | 0.252 | -0.176 |
| DS0c | -0.127 | -0.025 |
| GP01 | -1.167 | 1.237 |
| GP02 | 0.142 | 1.199 |
| GP0c | -0.98 | -0.222 |
| NOD | -0.155 | 0.493 |
| NZO | -0.241 | -0.577 |
| PWK | 0.45 | 0.475 |
| H37Rv_KO_CtpC | -0.639 | -1.403 |
| H37Rv_KO_CtpD | -0.759 | -1.06 |
| H37Rv_KO_Rv1272 | -1.334 | -1.481 |
| H37Rv_KO_SugABC | -0.141 | -0.441 |
| H37Rv_KO_MbtN | -0.518 | -0.927 |
| Trans05 | 0.096 | -0.236 |
| macrophage_unactivated | -0.71 | -1.979 |
| IL1 | -0.332 | -0.35 |
| Rapamycin | 0.129 | -0.193 |
| Tcell | -0.313 | -1.916 |
| GMCSF | 0.222 | -0.863 |
| IFNab | -0.178 | -1.128 |
| IFNg | 0.486 | 0.251 |
| IFNg_GMCSF1 | -0.424 | -0.405 |
| Rv1432_day32 | 0.368 | -0.639 |
| Rv1565c_day32 | -0.393 | -0.325 |
| secA2_input | 0.387 | 0.85 |
| delta_Rv3594 | -0.489 | -0.337 |
| delta_Rv3717 | -0.148 | 0.413 |
| delta_Rv3811 | 0.064 | -0.247 |
| delta_Rv0954 | -0.012 | -0.509 |
| PonA1 | -0.965 | 0.13 |
| EccD1_KO | -0.105 | 0.829 |
| EspI_KO | -0.448 | 1.446 |
| PE35_KO | 0.0 | 0.032 |
| PPE68_KO | -0.179 | -0.544 |
| glycerol2 | -0.454 | -0.75 |
| lignocerate | -0.369 | -1.076 |
| oleate | -0.096 | -0.298 |
| phosphatidylcholine | -0.368 | -0.926 |
| acetate | -1.122 | -1.709 |
| glucAc | -0.605 | -1.251 |
| Rv0950ko | -0.618 | 0.181 |
| Rv1096ko | -0.118 | 1.252 |
| Rv3684ko | -0.154 | 1.238 |
| delta_otsA_trehalose | -0.113 | 0.972 |