Top 10 genes with highest correlation to Rv1317c/alkA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1368/lprF | (cc=0.4752) | info on Rv1368/lprF |
| Rv2394/ggtB | (cc=0.471) | info on Rv2394/ggtB |
| Rv1290c/- | (cc=0.4682) | info on Rv1290c/- |
| Rv2484c/- | (cc=0.4676) | info on Rv2484c/- |
| Rv2715/- | (cc=0.4611) | info on Rv2715/- |
| Rv2701c/suhB | (cc=0.4335) | info on Rv2701c/suhB |
| Rv0338c/- | (cc=0.4296) | info on Rv0338c/- |
| Rv0069c/sdaA | (cc=0.4268) | info on Rv0069c/sdaA |
| Rv2189c/- | (cc=0.4138) | info on Rv2189c/- |
| Rv0484c/- | (cc=0.4084) | info on Rv0484c/- |
Correlation of Rv1317c/alkA with Rv1290c/-
Normalized LFCs for Rv1317c/alkA:
(description and provenance of datasets)
| Rv1317c/alkA | Rv1290c/- | |
| Fe_supp_jason_reseq | -0.628 | 0.044 |
| low_pH_jason_reseq | -1.337 | -0.639 |
| NO_jason_reseq | -0.711 | 0.016 |
| B6_jason_reseq | -0.498 | -0.063 |
| MHCII_jason_reseq | -0.365 | 0.286 |
| Isoniazid02 | 1.264 | 1.887 |
| Rifampicin4 | 0.062 | 0.23 |
| Ethambutol3 | 1.267 | 1.818 |
| Meropenem3 | 0.236 | 0.395 |
| Vancomycin16 | 0.297 | 0.454 |
| Rv2680_day32 | 0.21 | 0.279 |
| H37Rv_KO_MarP | 0.353 | 0.216 |
| hypoxia_3wks | 0.132 | 0.0 |
| hypoxia_6wks | 0.086 | -0.069 |
| glycerol | -0.377 | -0.007 |
| cholesterol | 1.811 | 0.327 |
| AJ | -0.281 | 0.35 |
| Bibs02 | -0.342 | -0.174 |
| Bibs02c | 0.867 | 0.167 |
| BL6 | -0.792 | 0.291 |
| BL6a | 0.423 | 0.143 |
| BXD01 | -0.77 | 0.218 |
| BXD010 | -0.141 | -0.025 |
| BXD011 | -0.328 | -0.01 |
| BXD03 | -0.599 | 0.381 |
| BXD04 | -0.156 | 0.473 |
| BXD05 | -0.677 | 0.0 |
| BXD06 | 0.156 | 0.145 |
| BXD07 | -0.259 | 0.361 |
| BXD08 | 0.103 | 0.111 |
| BXD09 | -0.458 | 0.022 |
| CAST | -0.47 | 0.33 |
| CCcont | -0.973 | -0.072 |
| DS01 | -0.4 | 0.0 |
| DS02 | -0.917 | -0.178 |
| DS04 | 0.252 | -0.103 |
| DS0c | -0.127 | 0.083 |
| GP01 | -1.167 | 0.544 |
| GP02 | 0.142 | 0.278 |
| GP0c | -0.98 | 0.243 |
| NOD | -0.155 | 0.7 |
| NZO | -0.241 | 0.406 |
| PWK | 0.45 | 0.142 |
| H37Rv_KO_CtpC | -0.639 | 0.182 |
| H37Rv_KO_CtpD | -0.759 | -0.44 |
| H37Rv_KO_Rv1272 | -1.334 | -0.235 |
| H37Rv_KO_SugABC | -0.141 | 0.418 |
| H37Rv_KO_MbtN | -0.518 | -0.037 |
| Trans05 | 0.096 | 0.569 |
| macrophage_unactivated | -0.71 | -0.328 |
| IL1 | -0.332 | 0.033 |
| Rapamycin | 0.129 | -0.19 |
| Tcell | -0.313 | 0.482 |
| GMCSF | 0.222 | -0.074 |
| IFNab | -0.178 | -0.26 |
| IFNg | 0.486 | 0.016 |
| IFNg_GMCSF1 | -0.424 | -0.035 |
| Rv1432_day32 | 0.368 | 0.056 |
| Rv1565c_day32 | -0.393 | -0.204 |
| secA2_input | 0.387 | 0.111 |
| delta_Rv3594 | -0.489 | 0.132 |
| delta_Rv3717 | -0.148 | -0.104 |
| delta_Rv3811 | 0.064 | -0.135 |
| delta_Rv0954 | -0.012 | 0.724 |
| PonA1 | -0.965 | -0.237 |
| EccD1_KO | -0.105 | 0.296 |
| EspI_KO | -0.448 | 0.234 |
| PE35_KO | 0.0 | 0.467 |
| PPE68_KO | -0.179 | 0.448 |
| glycerol2 | -0.454 | 0.324 |
| lignocerate | -0.369 | 0.424 |
| oleate | -0.096 | 0.383 |
| phosphatidylcholine | -0.368 | 0.681 |
| acetate | -1.122 | 0.1 |
| glucAc | -0.605 | -0.022 |
| Rv0950ko | -0.618 | -0.036 |
| Rv1096ko | -0.118 | -0.036 |
| Rv3684ko | -0.154 | -0.187 |
| delta_otsA_trehalose | -0.113 | -0.314 |