Top 10 genes with highest correlation to Rv1262c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0347/- | (cc=0.4835) | info on Rv0347/- |
| Rv0493c/- | (cc=0.4744) | info on Rv0493c/- |
| Rv0077c/- | (cc=0.4677) | info on Rv0077c/- |
| Rv1718/- | (cc=0.4589) | info on Rv1718/- |
| Rv0592/mce2D | (cc=0.4415) | info on Rv0592/mce2D |
| Rv2466c/- | (cc=0.4412) | info on Rv2466c/- |
| Rv0664/vapB8 | (cc=0.4353) | info on Rv0664/vapB8 |
| Rv0586/mce2R | (cc=0.4288) | info on Rv0586/mce2R |
| Rv0372c/- | (cc=0.425) | info on Rv0372c/- |
| Rv1403c/- | (cc=0.4137) | info on Rv1403c/- |
Correlation of Rv1262c/- with Rv2466c/-
Normalized LFCs for Rv1262c/-:
(description and provenance of datasets)
| Rv1262c/- | Rv2466c/- | |
| Fe_supp_jason_reseq | 0.391 | 1.149 |
| low_pH_jason_reseq | -1.345 | 0.534 |
| NO_jason_reseq | -0.244 | -1.536 |
| B6_jason_reseq | 1.11 | 1.058 |
| MHCII_jason_reseq | 1.753 | 1.613 |
| Isoniazid02 | -0.162 | 0.537 |
| Rifampicin4 | -0.428 | -0.049 |
| Ethambutol3 | -0.457 | 0.627 |
| Meropenem3 | 0.062 | 0.442 |
| Vancomycin16 | -0.204 | 0.456 |
| Rv2680_day32 | -3.429 | 1.863 |
| H37Rv_KO_MarP | -0.967 | -0.31 |
| hypoxia_3wks | 0.0 | 0.698 |
| hypoxia_6wks | 0.683 | 0.814 |
| glycerol | 0.55 | 0.837 |
| cholesterol | 0.381 | 0.198 |
| AJ | 0.14 | -0.049 |
| Bibs02 | 0.362 | 0.616 |
| Bibs02c | 0.843 | -0.089 |
| BL6 | -0.397 | -0.238 |
| BL6a | 0.155 | -0.172 |
| BXD01 | -0.72 | -0.773 |
| BXD010 | -1.471 | -0.428 |
| BXD011 | -0.224 | -0.319 |
| BXD03 | -0.678 | -0.504 |
| BXD04 | -0.403 | -0.563 |
| BXD05 | 0.678 | -0.314 |
| BXD06 | -0.505 | -0.067 |
| BXD07 | -0.6 | -0.544 |
| BXD08 | -0.346 | -1.001 |
| BXD09 | -0.045 | -0.07 |
| CAST | 0.432 | -0.167 |
| CCcont | -1.218 | -0.401 |
| DS01 | 0.643 | 0.113 |
| DS02 | 0.419 | 0.377 |
| DS04 | 0.207 | 0.533 |
| DS0c | 1.802 | 1.094 |
| GP01 | 1.146 | 0.454 |
| GP02 | -0.292 | 0.42 |
| GP0c | 0.348 | -0.326 |
| NOD | -1.44 | -0.129 |
| NZO | 1.195 | 0.415 |
| PWK | -0.607 | -0.186 |
| H37Rv_KO_CtpC | -1.414 | -1.419 |
| H37Rv_KO_CtpD | 0.997 | -0.577 |
| H37Rv_KO_Rv1272 | -1.619 | -2.473 |
| H37Rv_KO_SugABC | -2.256 | -1.941 |
| H37Rv_KO_MbtN | -1.753 | -0.249 |
| Trans05 | -0.033 | 0.38 |
| macrophage_unactivated | -0.663 | -0.773 |
| IL1 | 0.237 | -0.303 |
| Rapamycin | 0.157 | -0.031 |
| Tcell | -0.349 | -0.798 |
| GMCSF | -0.137 | 0.177 |
| IFNab | 1.811 | 0.0 |
| IFNg | 0.083 | -0.414 |
| IFNg_GMCSF1 | -0.132 | -0.031 |
| Rv1432_day32 | 0.398 | 0.171 |
| Rv1565c_day32 | 0.218 | -0.218 |
| secA2_input | -0.817 | -2.736 |
| delta_Rv3594 | -0.2 | -0.493 |
| delta_Rv3717 | -0.184 | 0.181 |
| delta_Rv3811 | 0.04 | 0.119 |
| delta_Rv0954 | -1.828 | -0.602 |
| PonA1 | -0.151 | 0.277 |
| EccD1_KO | -0.77 | -0.187 |
| EspI_KO | 0.77 | 0.95 |
| PE35_KO | -0.201 | -0.47 |
| PPE68_KO | -1.459 | -0.045 |
| glycerol2 | -0.904 | -0.357 |
| lignocerate | 0.699 | -0.051 |
| oleate | -3.713 | -0.716 |
| phosphatidylcholine | -0.727 | -0.16 |
| acetate | -0.46 | -0.093 |
| glucAc | 0.716 | 0.123 |
| Rv0950ko | 1.324 | -0.286 |
| Rv1096ko | 1.876 | 0.727 |
| Rv3684ko | 1.618 | 0.897 |
| delta_otsA_trehalose | 1.906 | 1.829 |