Top 10 genes with highest correlation to Rv1262c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0347/- | (cc=0.4835) | info on Rv0347/- |
| Rv0493c/- | (cc=0.4744) | info on Rv0493c/- |
| Rv0077c/- | (cc=0.4677) | info on Rv0077c/- |
| Rv1718/- | (cc=0.4589) | info on Rv1718/- |
| Rv0592/mce2D | (cc=0.4415) | info on Rv0592/mce2D |
| Rv2466c/- | (cc=0.4412) | info on Rv2466c/- |
| Rv0664/vapB8 | (cc=0.4353) | info on Rv0664/vapB8 |
| Rv0586/mce2R | (cc=0.4288) | info on Rv0586/mce2R |
| Rv0372c/- | (cc=0.425) | info on Rv0372c/- |
| Rv1403c/- | (cc=0.4137) | info on Rv1403c/- |
Correlation of Rv1262c/- with Rv0586/mce2R
Normalized LFCs for Rv1262c/-:
(description and provenance of datasets)
| Rv1262c/- | Rv0586/mce2R | |
| Fe_supp_jason_reseq | 0.391 | 0.147 |
| low_pH_jason_reseq | -1.345 | -0.391 |
| NO_jason_reseq | -0.244 | 0.895 |
| B6_jason_reseq | 1.11 | -0.229 |
| MHCII_jason_reseq | 1.753 | 0.749 |
| Isoniazid02 | -0.162 | -0.422 |
| Rifampicin4 | -0.428 | -1.584 |
| Ethambutol3 | -0.457 | -0.109 |
| Meropenem3 | 0.062 | 0.0 |
| Vancomycin16 | -0.204 | -0.366 |
| Rv2680_day32 | -3.429 | -0.803 |
| H37Rv_KO_MarP | -0.967 | 0.162 |
| hypoxia_3wks | 0.0 | 0.486 |
| hypoxia_6wks | 0.683 | 0.564 |
| glycerol | 0.55 | -0.693 |
| cholesterol | 0.381 | 0.531 |
| AJ | 0.14 | 0.884 |
| Bibs02 | 0.362 | 0.898 |
| Bibs02c | 0.843 | -0.781 |
| BL6 | -0.397 | -1.198 |
| BL6a | 0.155 | 0.082 |
| BXD01 | -0.72 | -1.181 |
| BXD010 | -1.471 | -1.162 |
| BXD011 | -0.224 | -0.475 |
| BXD03 | -0.678 | 0.393 |
| BXD04 | -0.403 | 0.124 |
| BXD05 | 0.678 | 0.233 |
| BXD06 | -0.505 | -0.086 |
| BXD07 | -0.6 | -0.558 |
| BXD08 | -0.346 | 0.23 |
| BXD09 | -0.045 | 0.166 |
| CAST | 0.432 | 0.185 |
| CCcont | -1.218 | -1.212 |
| DS01 | 0.643 | 0.57 |
| DS02 | 0.419 | 0.665 |
| DS04 | 0.207 | -0.61 |
| DS0c | 1.802 | 0.663 |
| GP01 | 1.146 | -0.998 |
| GP02 | -0.292 | -1.171 |
| GP0c | 0.348 | -0.269 |
| NOD | -1.44 | -0.644 |
| NZO | 1.195 | -0.413 |
| PWK | -0.607 | 0.831 |
| H37Rv_KO_CtpC | -1.414 | -1.11 |
| H37Rv_KO_CtpD | 0.997 | -0.865 |
| H37Rv_KO_Rv1272 | -1.619 | -1.022 |
| H37Rv_KO_SugABC | -2.256 | -1.394 |
| H37Rv_KO_MbtN | -1.753 | -0.791 |
| Trans05 | -0.033 | -1.185 |
| macrophage_unactivated | -0.663 | -0.915 |
| IL1 | 0.237 | 0.374 |
| Rapamycin | 0.157 | -0.135 |
| Tcell | -0.349 | 0.411 |
| GMCSF | -0.137 | -1.212 |
| IFNab | 1.811 | -0.133 |
| IFNg | 0.083 | 0.743 |
| IFNg_GMCSF1 | -0.132 | 0.0 |
| Rv1432_day32 | 0.398 | -0.113 |
| Rv1565c_day32 | 0.218 | 0.746 |
| secA2_input | -0.817 | 0.0 |
| delta_Rv3594 | -0.2 | 1.078 |
| delta_Rv3717 | -0.184 | -0.214 |
| delta_Rv3811 | 0.04 | 0.617 |
| delta_Rv0954 | -1.828 | -1.362 |
| PonA1 | -0.151 | -1.217 |
| EccD1_KO | -0.77 | -1.204 |
| EspI_KO | 0.77 | -0.371 |
| PE35_KO | -0.201 | -1.359 |
| PPE68_KO | -1.459 | -0.969 |
| glycerol2 | -0.904 | 0.581 |
| lignocerate | 0.699 | 0.505 |
| oleate | -3.713 | -0.634 |
| phosphatidylcholine | -0.727 | 0.13 |
| acetate | -0.46 | 0.919 |
| glucAc | 0.716 | 0.93 |
| Rv0950ko | 1.324 | -0.311 |
| Rv1096ko | 1.876 | 0.881 |
| Rv3684ko | 1.618 | 1.15 |
| delta_otsA_trehalose | 1.906 | -0.05 |