Top 10 genes with highest correlation to Rv1262c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0347/- | (cc=0.4835) | info on Rv0347/- |
| Rv0493c/- | (cc=0.4744) | info on Rv0493c/- |
| Rv0077c/- | (cc=0.4677) | info on Rv0077c/- |
| Rv1718/- | (cc=0.4589) | info on Rv1718/- |
| Rv0592/mce2D | (cc=0.4415) | info on Rv0592/mce2D |
| Rv2466c/- | (cc=0.4412) | info on Rv2466c/- |
| Rv0664/vapB8 | (cc=0.4353) | info on Rv0664/vapB8 |
| Rv0586/mce2R | (cc=0.4288) | info on Rv0586/mce2R |
| Rv0372c/- | (cc=0.425) | info on Rv0372c/- |
| Rv1403c/- | (cc=0.4137) | info on Rv1403c/- |
Correlation of Rv1262c/- with Rv0664/vapB8
Normalized LFCs for Rv1262c/-:
(description and provenance of datasets)
| Rv1262c/- | Rv0664/vapB8 | |
| Fe_supp_jason_reseq | 0.391 | 1.137 |
| low_pH_jason_reseq | -1.345 | 2.454 |
| NO_jason_reseq | -0.244 | 0.89 |
| B6_jason_reseq | 1.11 | 1.504 |
| MHCII_jason_reseq | 1.753 | 0.379 |
| Isoniazid02 | -0.162 | -0.674 |
| Rifampicin4 | -0.428 | -0.853 |
| Ethambutol3 | -0.457 | -0.79 |
| Meropenem3 | 0.062 | -0.579 |
| Vancomycin16 | -0.204 | -0.231 |
| Rv2680_day32 | -3.429 | -3.466 |
| H37Rv_KO_MarP | -0.967 | 0.569 |
| hypoxia_3wks | 0.0 | -1.639 |
| hypoxia_6wks | 0.683 | 1.374 |
| glycerol | 0.55 | -0.12 |
| cholesterol | 0.381 | 0.76 |
| AJ | 0.14 | 0.012 |
| Bibs02 | 0.362 | 1.628 |
| Bibs02c | 0.843 | -0.324 |
| BL6 | -0.397 | -0.31 |
| BL6a | 0.155 | -0.653 |
| BXD01 | -0.72 | -0.555 |
| BXD010 | -1.471 | -0.555 |
| BXD011 | -0.224 | -1.439 |
| BXD03 | -0.678 | -2.585 |
| BXD04 | -0.403 | -2.292 |
| BXD05 | 0.678 | -1.153 |
| BXD06 | -0.505 | -1.033 |
| BXD07 | -0.6 | -1.003 |
| BXD08 | -0.346 | -1.111 |
| BXD09 | -0.045 | -1.236 |
| CAST | 0.432 | 0.479 |
| CCcont | -1.218 | -1.584 |
| DS01 | 0.643 | 1.48 |
| DS02 | 0.419 | 0.373 |
| DS04 | 0.207 | 1.131 |
| DS0c | 1.802 | 1.703 |
| GP01 | 1.146 | -1.047 |
| GP02 | -0.292 | -0.43 |
| GP0c | 0.348 | -0.104 |
| NOD | -1.44 | 0.368 |
| NZO | 1.195 | -1.143 |
| PWK | -0.607 | -0.358 |
| H37Rv_KO_CtpC | -1.414 | -4.787 |
| H37Rv_KO_CtpD | 0.997 | -3.036 |
| H37Rv_KO_Rv1272 | -1.619 | -2.03 |
| H37Rv_KO_SugABC | -2.256 | -0.216 |
| H37Rv_KO_MbtN | -1.753 | -3.037 |
| Trans05 | -0.033 | -2.125 |
| macrophage_unactivated | -0.663 | -1.461 |
| IL1 | 0.237 | -1.071 |
| Rapamycin | 0.157 | 0.552 |
| Tcell | -0.349 | 0.437 |
| GMCSF | -0.137 | -0.428 |
| IFNab | 1.811 | 0.71 |
| IFNg | 0.083 | 2.638 |
| IFNg_GMCSF1 | -0.132 | 0.273 |
| Rv1432_day32 | 0.398 | -1.605 |
| Rv1565c_day32 | 0.218 | 0.0 |
| secA2_input | -0.817 | -2.423 |
| delta_Rv3594 | -0.2 | 1.643 |
| delta_Rv3717 | -0.184 | -0.065 |
| delta_Rv3811 | 0.04 | 0.11 |
| delta_Rv0954 | -1.828 | 0.244 |
| PonA1 | -0.151 | 2.248 |
| EccD1_KO | -0.77 | 1.644 |
| EspI_KO | 0.77 | 0.987 |
| PE35_KO | -0.201 | 0.866 |
| PPE68_KO | -1.459 | 0.675 |
| glycerol2 | -0.904 | 0.062 |
| lignocerate | 0.699 | 0.784 |
| oleate | -3.713 | -2.185 |
| phosphatidylcholine | -0.727 | 0.861 |
| acetate | -0.46 | 2.534 |
| glucAc | 0.716 | 1.623 |
| Rv0950ko | 1.324 | 0.971 |
| Rv1096ko | 1.876 | 2.735 |
| Rv3684ko | 1.618 | 2.338 |
| delta_otsA_trehalose | 1.906 | 1.323 |