Top 10 genes with highest correlation to Rv1262c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0347/- | (cc=0.4835) | info on Rv0347/- |
| Rv0493c/- | (cc=0.4744) | info on Rv0493c/- |
| Rv0077c/- | (cc=0.4677) | info on Rv0077c/- |
| Rv1718/- | (cc=0.4589) | info on Rv1718/- |
| Rv0592/mce2D | (cc=0.4415) | info on Rv0592/mce2D |
| Rv2466c/- | (cc=0.4412) | info on Rv2466c/- |
| Rv0664/vapB8 | (cc=0.4353) | info on Rv0664/vapB8 |
| Rv0586/mce2R | (cc=0.4288) | info on Rv0586/mce2R |
| Rv0372c/- | (cc=0.425) | info on Rv0372c/- |
| Rv1403c/- | (cc=0.4137) | info on Rv1403c/- |
Correlation of Rv1262c/- with Rv0347/-
Normalized LFCs for Rv1262c/-:
(description and provenance of datasets)
| Rv1262c/- | Rv0347/- | |
| Fe_supp_jason_reseq | 0.391 | -0.63 |
| low_pH_jason_reseq | -1.345 | -1.29 |
| NO_jason_reseq | -0.244 | 0.129 |
| B6_jason_reseq | 1.11 | 1.434 |
| MHCII_jason_reseq | 1.753 | 0.048 |
| Isoniazid02 | -0.162 | 1.582 |
| Rifampicin4 | -0.428 | -0.165 |
| Ethambutol3 | -0.457 | 1.39 |
| Meropenem3 | 0.062 | -0.151 |
| Vancomycin16 | -0.204 | 0.589 |
| Rv2680_day32 | -3.429 | 0.0 |
| H37Rv_KO_MarP | -0.967 | 0.535 |
| hypoxia_3wks | 0.0 | -0.255 |
| hypoxia_6wks | 0.683 | 0.251 |
| glycerol | 0.55 | 1.191 |
| cholesterol | 0.381 | 0.568 |
| AJ | 0.14 | 0.212 |
| Bibs02 | 0.362 | 0.717 |
| Bibs02c | 0.843 | -0.359 |
| BL6 | -0.397 | 1.056 |
| BL6a | 0.155 | -1.036 |
| BXD01 | -0.72 | -0.751 |
| BXD010 | -1.471 | -0.67 |
| BXD011 | -0.224 | 0.0 |
| BXD03 | -0.678 | -1.115 |
| BXD04 | -0.403 | -0.713 |
| BXD05 | 0.678 | -0.776 |
| BXD06 | -0.505 | -0.043 |
| BXD07 | -0.6 | 0.383 |
| BXD08 | -0.346 | -0.696 |
| BXD09 | -0.045 | -0.735 |
| CAST | 0.432 | -0.15 |
| CCcont | -1.218 | -0.372 |
| DS01 | 0.643 | -0.236 |
| DS02 | 0.419 | 1.282 |
| DS04 | 0.207 | -0.062 |
| DS0c | 1.802 | -0.456 |
| GP01 | 1.146 | -0.031 |
| GP02 | -0.292 | -0.527 |
| GP0c | 0.348 | -0.551 |
| NOD | -1.44 | -1.061 |
| NZO | 1.195 | 0.737 |
| PWK | -0.607 | -0.264 |
| H37Rv_KO_CtpC | -1.414 | -1.456 |
| H37Rv_KO_CtpD | 0.997 | -1.454 |
| H37Rv_KO_Rv1272 | -1.619 | -1.759 |
| H37Rv_KO_SugABC | -2.256 | -1.137 |
| H37Rv_KO_MbtN | -1.753 | -1.089 |
| Trans05 | -0.033 | -0.988 |
| macrophage_unactivated | -0.663 | -1.016 |
| IL1 | 0.237 | -0.611 |
| Rapamycin | 0.157 | -0.632 |
| Tcell | -0.349 | -0.16 |
| GMCSF | -0.137 | 0.364 |
| IFNab | 1.811 | 0.142 |
| IFNg | 0.083 | 0.0 |
| IFNg_GMCSF1 | -0.132 | 0.0 |
| Rv1432_day32 | 0.398 | 0.0 |
| Rv1565c_day32 | 0.218 | 1.579 |
| secA2_input | -0.817 | 0.606 |
| delta_Rv3594 | -0.2 | 0.788 |
| delta_Rv3717 | -0.184 | -0.438 |
| delta_Rv3811 | 0.04 | 0.287 |
| delta_Rv0954 | -1.828 | 0.0 |
| PonA1 | -0.151 | 0.323 |
| EccD1_KO | -0.77 | -0.145 |
| EspI_KO | 0.77 | -0.53 |
| PE35_KO | -0.201 | -1.003 |
| PPE68_KO | -1.459 | -1.469 |
| glycerol2 | -0.904 | -0.88 |
| lignocerate | 0.699 | -0.471 |
| oleate | -3.713 | -0.89 |
| phosphatidylcholine | -0.727 | -0.704 |
| acetate | -0.46 | -0.836 |
| glucAc | 0.716 | 0.0 |
| Rv0950ko | 1.324 | 1.848 |
| Rv1096ko | 1.876 | 3.384 |
| Rv3684ko | 1.618 | 3.674 |
| delta_otsA_trehalose | 1.906 | 2.561 |