Top 10 genes with highest correlation to Rv1245c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2088/pknJ | (cc=0.4545) | info on Rv2088/pknJ |
| Rv0731c/- | (cc=0.4479) | info on Rv0731c/- |
| Rv1831/- | (cc=0.4248) | info on Rv1831/- |
| Rv2770c/PPE44 | (cc=0.4242) | info on Rv2770c/PPE44 |
| Rv2695/- | (cc=0.418) | info on Rv2695/- |
| Rv0576/- | (cc=0.4057) | info on Rv0576/- |
| Rv2495c/bkdC | (cc=0.4046) | info on Rv2495c/bkdC |
| Rv3521/- | (cc=0.4045) | info on Rv3521/- |
| Rv2618/- | (cc=0.3913) | info on Rv2618/- |
| Rv3268/- | (cc=0.3895) | info on Rv3268/- |
Correlation of Rv1245c/- with Rv2495c/bkdC
Normalized LFCs for Rv1245c/-:
(description and provenance of datasets)
| Rv1245c/- | Rv2495c/bkdC | |
| Fe_supp_jason_reseq | -0.677 | -5.05 |
| low_pH_jason_reseq | -0.534 | -5.352 |
| NO_jason_reseq | -0.084 | 0.252 |
| B6_jason_reseq | -1.086 | -2.921 |
| MHCII_jason_reseq | -0.021 | -2.608 |
| Isoniazid02 | -0.386 | 0.333 |
| Rifampicin4 | 0.314 | -1.652 |
| Ethambutol3 | 0.241 | -0.332 |
| Meropenem3 | 0.183 | -0.061 |
| Vancomycin16 | -0.082 | 0.0 |
| Rv2680_day32 | -0.198 | -0.168 |
| H37Rv_KO_MarP | -0.056 | 0.769 |
| hypoxia_3wks | 0.12 | 0.263 |
| hypoxia_6wks | 0.585 | 0.069 |
| glycerol | -0.051 | -0.628 |
| cholesterol | -0.101 | 0.684 |
| AJ | -0.203 | -0.914 |
| Bibs02 | -0.886 | -1.495 |
| Bibs02c | 0.53 | 0.735 |
| BL6 | -0.478 | -0.869 |
| BL6a | 0.352 | 0.973 |
| BXD01 | -0.253 | 0.0 |
| BXD010 | -0.414 | -0.622 |
| BXD011 | -0.369 | 0.448 |
| BXD03 | -0.501 | 1.318 |
| BXD04 | 0.764 | 0.78 |
| BXD05 | -0.012 | 0.078 |
| BXD06 | -0.081 | 0.441 |
| BXD07 | -0.401 | -0.375 |
| BXD08 | 1.002 | 0.702 |
| BXD09 | -0.36 | 0.232 |
| CAST | -0.245 | -0.537 |
| CCcont | -0.305 | -0.797 |
| DS01 | 0.453 | 0.204 |
| DS02 | -0.211 | 0.52 |
| DS04 | 1.19 | 1.159 |
| DS0c | 0.141 | 1.538 |
| GP01 | 0.677 | 0.085 |
| GP02 | 1.268 | -0.797 |
| GP0c | 0.388 | -0.903 |
| NOD | -0.303 | -0.986 |
| NZO | -0.533 | -0.186 |
| PWK | -0.421 | 0.222 |
| H37Rv_KO_CtpC | 0.368 | 0.5 |
| H37Rv_KO_CtpD | 0.321 | 0.333 |
| H37Rv_KO_Rv1272 | 0.179 | 0.434 |
| H37Rv_KO_SugABC | 0.017 | -0.877 |
| H37Rv_KO_MbtN | -0.179 | -0.32 |
| Trans05 | 0.777 | 1.474 |
| macrophage_unactivated | 0.218 | 0.994 |
| IL1 | 0.178 | 1.258 |
| Rapamycin | 0.184 | 0.697 |
| Tcell | -0.453 | 0.74 |
| GMCSF | 0.235 | -0.19 |
| IFNab | 0.121 | -0.109 |
| IFNg | 0.08 | 0.358 |
| IFNg_GMCSF1 | 0.707 | 0.217 |
| Rv1432_day32 | 0.155 | 0.0 |
| Rv1565c_day32 | -1.632 | -0.395 |
| secA2_input | -0.798 | -0.611 |
| delta_Rv3594 | 0.106 | -0.561 |
| delta_Rv3717 | 0.273 | -0.076 |
| delta_Rv3811 | 0.0 | -0.546 |
| delta_Rv0954 | -0.047 | -0.078 |
| PonA1 | 0.285 | -0.874 |
| EccD1_KO | 0.668 | -0.898 |
| EspI_KO | -0.068 | -1.962 |
| PE35_KO | 0.306 | -0.709 |
| PPE68_KO | -0.32 | -0.246 |
| glycerol2 | 0.06 | -0.68 |
| lignocerate | -0.457 | -0.591 |
| oleate | 0.411 | 0.142 |
| phosphatidylcholine | -0.139 | -0.398 |
| acetate | -0.426 | -1.197 |
| glucAc | -0.459 | -1.535 |
| Rv0950ko | 0.063 | 0.754 |
| Rv1096ko | 0.0 | 1.221 |
| Rv3684ko | 0.233 | 1.608 |
| delta_otsA_trehalose | -1.386 | -1.661 |