Top 10 genes with highest correlation to Rv1245c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2088/pknJ | (cc=0.4545) | info on Rv2088/pknJ |
| Rv0731c/- | (cc=0.4479) | info on Rv0731c/- |
| Rv1831/- | (cc=0.4248) | info on Rv1831/- |
| Rv2770c/PPE44 | (cc=0.4242) | info on Rv2770c/PPE44 |
| Rv2695/- | (cc=0.418) | info on Rv2695/- |
| Rv0576/- | (cc=0.4057) | info on Rv0576/- |
| Rv2495c/bkdC | (cc=0.4046) | info on Rv2495c/bkdC |
| Rv3521/- | (cc=0.4045) | info on Rv3521/- |
| Rv2618/- | (cc=0.3913) | info on Rv2618/- |
| Rv3268/- | (cc=0.3895) | info on Rv3268/- |
Correlation of Rv1245c/- with Rv2088/pknJ
Normalized LFCs for Rv1245c/-:
(description and provenance of datasets)
| Rv1245c/- | Rv2088/pknJ | |
| Fe_supp_jason_reseq | -0.677 | -0.822 |
| low_pH_jason_reseq | -0.534 | 0.0 |
| NO_jason_reseq | -0.084 | -0.32 |
| B6_jason_reseq | -1.086 | -0.171 |
| MHCII_jason_reseq | -0.021 | 0.479 |
| Isoniazid02 | -0.386 | -0.02 |
| Rifampicin4 | 0.314 | 0.463 |
| Ethambutol3 | 0.241 | -0.179 |
| Meropenem3 | 0.183 | 0.307 |
| Vancomycin16 | -0.082 | 0.584 |
| Rv2680_day32 | -0.198 | 0.407 |
| H37Rv_KO_MarP | -0.056 | -0.522 |
| hypoxia_3wks | 0.12 | 0.73 |
| hypoxia_6wks | 0.585 | -0.255 |
| glycerol | -0.051 | 0.206 |
| cholesterol | -0.101 | 0.233 |
| AJ | -0.203 | 0.237 |
| Bibs02 | -0.886 | -0.101 |
| Bibs02c | 0.53 | 0.905 |
| BL6 | -0.478 | -0.555 |
| BL6a | 0.352 | 0.386 |
| BXD01 | -0.253 | -0.187 |
| BXD010 | -0.414 | 0.083 |
| BXD011 | -0.369 | -0.07 |
| BXD03 | -0.501 | -0.036 |
| BXD04 | 0.764 | -0.033 |
| BXD05 | -0.012 | 0.201 |
| BXD06 | -0.081 | 0.275 |
| BXD07 | -0.401 | 0.285 |
| BXD08 | 1.002 | -0.512 |
| BXD09 | -0.36 | 0.193 |
| CAST | -0.245 | 0.782 |
| CCcont | -0.305 | -0.757 |
| DS01 | 0.453 | -0.339 |
| DS02 | -0.211 | -0.345 |
| DS04 | 1.19 | 0.659 |
| DS0c | 0.141 | 0.113 |
| GP01 | 0.677 | 0.735 |
| GP02 | 1.268 | 1.395 |
| GP0c | 0.388 | 0.209 |
| NOD | -0.303 | 0.807 |
| NZO | -0.533 | -0.166 |
| PWK | -0.421 | 0.0 |
| H37Rv_KO_CtpC | 0.368 | -0.022 |
| H37Rv_KO_CtpD | 0.321 | 0.829 |
| H37Rv_KO_Rv1272 | 0.179 | 0.841 |
| H37Rv_KO_SugABC | 0.017 | 1.222 |
| H37Rv_KO_MbtN | -0.179 | -0.458 |
| Trans05 | 0.777 | 0.698 |
| macrophage_unactivated | 0.218 | -0.514 |
| IL1 | 0.178 | -0.116 |
| Rapamycin | 0.184 | -0.632 |
| Tcell | -0.453 | -0.531 |
| GMCSF | 0.235 | 0.246 |
| IFNab | 0.121 | -0.302 |
| IFNg | 0.08 | -0.104 |
| IFNg_GMCSF1 | 0.707 | 0.06 |
| Rv1432_day32 | 0.155 | 0.559 |
| Rv1565c_day32 | -1.632 | -0.09 |
| secA2_input | -0.798 | -1.257 |
| delta_Rv3594 | 0.106 | 0.635 |
| delta_Rv3717 | 0.273 | 0.341 |
| delta_Rv3811 | 0.0 | 0.287 |
| delta_Rv0954 | -0.047 | -0.394 |
| PonA1 | 0.285 | 0.223 |
| EccD1_KO | 0.668 | -0.51 |
| EspI_KO | -0.068 | -0.171 |
| PE35_KO | 0.306 | -0.044 |
| PPE68_KO | -0.32 | -0.048 |
| glycerol2 | 0.06 | -0.09 |
| lignocerate | -0.457 | -0.407 |
| oleate | 0.411 | 0.384 |
| phosphatidylcholine | -0.139 | 0.0 |
| acetate | -0.426 | -0.427 |
| glucAc | -0.459 | -0.823 |
| Rv0950ko | 0.063 | 0.326 |
| Rv1096ko | 0.0 | 0.953 |
| Rv3684ko | 0.233 | 0.403 |
| delta_otsA_trehalose | -1.386 | -1.715 |