Top 10 genes with highest correlation to Rv1223/htrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0678/- | (cc=0.4679) | info on Rv0678/- |
| Rv2833c/ugpB | (cc=0.4499) | info on Rv2833c/ugpB |
| Rv1261c/- | (cc=0.4449) | info on Rv1261c/- |
| Rv1021/- | (cc=0.4434) | info on Rv1021/- |
| Rv1009/rpfB | (cc=0.433) | info on Rv1009/rpfB |
| Rv1933c/fadE18 | (cc=0.4223) | info on Rv1933c/fadE18 |
| Rv3210c/- | (cc=0.4121) | info on Rv3210c/- |
| Rv2061c/- | (cc=0.4048) | info on Rv2061c/- |
| Rv3528c/- | (cc=0.3999) | info on Rv3528c/- |
| Rv1237/sugB | (cc=0.3979) | info on Rv1237/sugB |
Correlation of Rv1223/htrA with Rv3210c/-
Normalized LFCs for Rv1223/htrA:
(description and provenance of datasets)
| Rv1223/htrA | Rv3210c/- | |
| Fe_supp_jason_reseq | 0.169 | 2.062 |
| low_pH_jason_reseq | -0.316 | -3.853 |
| NO_jason_reseq | 0.0 | -2.056 |
| B6_jason_reseq | -0.326 | -1.674 |
| MHCII_jason_reseq | -0.873 | -2.452 |
| Isoniazid02 | 0.099 | -0.351 |
| Rifampicin4 | -0.26 | -0.311 |
| Ethambutol3 | -0.275 | 0.0 |
| Meropenem3 | -1.09 | 0.0 |
| Vancomycin16 | 0.353 | -0.305 |
| Rv2680_day32 | 1.77 | 0.617 |
| H37Rv_KO_MarP | -0.512 | -3.844 |
| hypoxia_3wks | -0.08 | -5.383 |
| hypoxia_6wks | -0.127 | -2.533 |
| glycerol | -0.222 | -0.709 |
| cholesterol | 1.211 | -0.509 |
| AJ | 0.637 | -0.18 |
| Bibs02 | -0.049 | 0.132 |
| Bibs02c | 0.53 | -0.336 |
| BL6 | 0.094 | 2.786 |
| BL6a | 0.198 | 3.965 |
| BXD01 | 0.927 | 4.097 |
| BXD010 | -0.141 | 4.494 |
| BXD011 | 0.424 | 4.043 |
| BXD03 | 0.98 | 2.532 |
| BXD04 | 0.959 | 4.283 |
| BXD05 | 0.341 | 3.297 |
| BXD06 | 0.719 | 4.797 |
| BXD07 | 0.809 | 4.33 |
| BXD08 | 0.817 | 4.103 |
| BXD09 | 1.089 | 4.378 |
| CAST | -0.859 | -0.809 |
| CCcont | 0.607 | 4.389 |
| DS01 | 0.399 | 0.0 |
| DS02 | 0.164 | -0.548 |
| DS04 | 0.194 | 1.97 |
| DS0c | -0.891 | -0.168 |
| GP01 | -0.883 | -0.077 |
| GP02 | -0.561 | 0.116 |
| GP0c | -0.105 | 1.73 |
| NOD | -1.298 | -0.789 |
| NZO | -0.338 | -0.701 |
| PWK | -1.047 | -0.689 |
| H37Rv_KO_CtpC | 0.901 | 1.944 |
| H37Rv_KO_CtpD | 0.064 | 1.545 |
| H37Rv_KO_Rv1272 | 1.814 | 2.512 |
| H37Rv_KO_SugABC | -1.163 | 3.415 |
| H37Rv_KO_MbtN | 0.719 | 5.206 |
| Trans05 | 0.249 | 3.053 |
| macrophage_unactivated | 0.445 | -0.716 |
| IL1 | 0.801 | 0.341 |
| Rapamycin | 1.089 | 0.0 |
| Tcell | 0.521 | -1.619 |
| GMCSF | 0.85 | 0.721 |
| IFNab | 0.707 | 2.283 |
| IFNg | 0.0 | 1.109 |
| IFNg_GMCSF1 | 0.443 | -0.396 |
| Rv1432_day32 | -2.177 | -1.71 |
| Rv1565c_day32 | 0.349 | -3.884 |
| secA2_input | -0.637 | 1.565 |
| delta_Rv3594 | -0.471 | 0.153 |
| delta_Rv3717 | -0.072 | 0.946 |
| delta_Rv3811 | -0.424 | 0.913 |
| delta_Rv0954 | -0.124 | -3.66 |
| PonA1 | -0.916 | -5.488 |
| EccD1_KO | -0.704 | -2.457 |
| EspI_KO | -0.61 | -2.073 |
| PE35_KO | 0.414 | -3.104 |
| PPE68_KO | -0.506 | -3.161 |
| glycerol2 | 0.0 | 0.82 |
| lignocerate | 0.452 | 0.0 |
| oleate | 1.194 | 0.0 |
| phosphatidylcholine | 0.976 | 0.0 |
| acetate | 0.451 | 0.0 |
| glucAc | -0.251 | 0.392 |
| Rv0950ko | 0.262 | -0.214 |
| Rv1096ko | 0.513 | 0.178 |
| Rv3684ko | 0.468 | 0.635 |
| delta_otsA_trehalose | 0.324 | 0.0 |