Top 10 genes with highest correlation to Rv1223/htrA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0678/- | (cc=0.4679) | info on Rv0678/- |
| Rv2833c/ugpB | (cc=0.4499) | info on Rv2833c/ugpB |
| Rv1261c/- | (cc=0.4449) | info on Rv1261c/- |
| Rv1021/- | (cc=0.4434) | info on Rv1021/- |
| Rv1009/rpfB | (cc=0.433) | info on Rv1009/rpfB |
| Rv1933c/fadE18 | (cc=0.4223) | info on Rv1933c/fadE18 |
| Rv3210c/- | (cc=0.4121) | info on Rv3210c/- |
| Rv2061c/- | (cc=0.4048) | info on Rv2061c/- |
| Rv3528c/- | (cc=0.3999) | info on Rv3528c/- |
| Rv1237/sugB | (cc=0.3979) | info on Rv1237/sugB |
Correlation of Rv1223/htrA with Rv2061c/-
Normalized LFCs for Rv1223/htrA:
(description and provenance of datasets)
| Rv1223/htrA | Rv2061c/- | |
| Fe_supp_jason_reseq | 0.169 | -0.24 |
| low_pH_jason_reseq | -0.316 | 1.166 |
| NO_jason_reseq | 0.0 | 0.021 |
| B6_jason_reseq | -0.326 | 0.145 |
| MHCII_jason_reseq | -0.873 | 0.051 |
| Isoniazid02 | 0.099 | -2.865 |
| Rifampicin4 | -0.26 | 0.463 |
| Ethambutol3 | -0.275 | -2.36 |
| Meropenem3 | -1.09 | -1.973 |
| Vancomycin16 | 0.353 | -0.87 |
| Rv2680_day32 | 1.77 | 0.067 |
| H37Rv_KO_MarP | -0.512 | 0.838 |
| hypoxia_3wks | -0.08 | -0.088 |
| hypoxia_6wks | -0.127 | 0.069 |
| glycerol | -0.222 | -0.685 |
| cholesterol | 1.211 | -0.847 |
| AJ | 0.637 | -0.087 |
| Bibs02 | -0.049 | 1.325 |
| Bibs02c | 0.53 | 0.887 |
| BL6 | 0.094 | -0.542 |
| BL6a | 0.198 | 0.97 |
| BXD01 | 0.927 | -0.037 |
| BXD010 | -0.141 | 0.502 |
| BXD011 | 0.424 | 0.229 |
| BXD03 | 0.98 | -0.423 |
| BXD04 | 0.959 | 0.935 |
| BXD05 | 0.341 | 0.21 |
| BXD06 | 0.719 | 0.759 |
| BXD07 | 0.809 | 0.147 |
| BXD08 | 0.817 | 0.452 |
| BXD09 | 1.089 | 0.37 |
| CAST | -0.859 | -0.721 |
| CCcont | 0.607 | -0.626 |
| DS01 | 0.399 | 1.073 |
| DS02 | 0.164 | 0.176 |
| DS04 | 0.194 | 0.333 |
| DS0c | -0.891 | -0.652 |
| GP01 | -0.883 | -1.547 |
| GP02 | -0.561 | -1.873 |
| GP0c | -0.105 | -2.341 |
| NOD | -1.298 | -1.103 |
| NZO | -0.338 | -0.075 |
| PWK | -1.047 | 0.627 |
| H37Rv_KO_CtpC | 0.901 | 0.758 |
| H37Rv_KO_CtpD | 0.064 | -1.788 |
| H37Rv_KO_Rv1272 | 1.814 | 0.833 |
| H37Rv_KO_SugABC | -1.163 | 0.009 |
| H37Rv_KO_MbtN | 0.719 | 1.646 |
| Trans05 | 0.249 | 0.314 |
| macrophage_unactivated | 0.445 | 0.455 |
| IL1 | 0.801 | 1.711 |
| Rapamycin | 1.089 | 0.408 |
| Tcell | 0.521 | 0.736 |
| GMCSF | 0.85 | 1.201 |
| IFNab | 0.707 | 0.402 |
| IFNg | 0.0 | 0.861 |
| IFNg_GMCSF1 | 0.443 | 1.562 |
| Rv1432_day32 | -2.177 | -0.597 |
| Rv1565c_day32 | 0.349 | -0.494 |
| secA2_input | -0.637 | -1.061 |
| delta_Rv3594 | -0.471 | -0.722 |
| delta_Rv3717 | -0.072 | -1.058 |
| delta_Rv3811 | -0.424 | -1.419 |
| delta_Rv0954 | -0.124 | -1.026 |
| PonA1 | -0.916 | -0.372 |
| EccD1_KO | -0.704 | -0.891 |
| EspI_KO | -0.61 | -0.499 |
| PE35_KO | 0.414 | -1.234 |
| PPE68_KO | -0.506 | -1.789 |
| glycerol2 | 0.0 | -0.056 |
| lignocerate | 0.452 | -0.761 |
| oleate | 1.194 | 0.926 |
| phosphatidylcholine | 0.976 | 0.459 |
| acetate | 0.451 | 0.281 |
| glucAc | -0.251 | -2.954 |
| Rv0950ko | 0.262 | -1.306 |
| Rv1096ko | 0.513 | -0.464 |
| Rv3684ko | 0.468 | 0.481 |
| delta_otsA_trehalose | 0.324 | -0.053 |