TnSeqCorr

Top 10 genes with highest correlation to Rv1206/fadD6:

update plotcorrelationlink to info on gene
Rv0554/bpoC (cc=0.6681) info on Rv0554/bpoC
Rv2681/- (cc=0.5972) info on Rv2681/-
Rv1270c/lprA (cc=0.581) info on Rv1270c/lprA
Rv1316c/ogt (cc=0.5543) info on Rv1316c/ogt
Rv1231c/- (cc=0.5349) info on Rv1231c/-
Rv2426c/- (cc=0.5312) info on Rv2426c/-
Rv1439c/- (cc=0.5276) info on Rv1439c/-
Rv1180/pks3 (cc=0.5274) info on Rv1180/pks3
Rv0470A/- (cc=0.5216) info on Rv0470A/-
Rv2564/glnQ (cc=0.5214) info on Rv2564/glnQ

Correlation of Rv1206/fadD6 with Rv1270c/lprA

Normalized LFCs for Rv1206/fadD6:
(description and provenance of datasets)
Rv1206/fadD6Rv1270c/lprA
Fe_supp_jason_reseq

-0.75

0.775

low_pH_jason_reseq

1.65

0.288

NO_jason_reseq

2.696

1.888

B6_jason_reseq

2.216

0.939

MHCII_jason_reseq

-0.938

1.177

Isoniazid02

-0.815

0.108

Rifampicin4

-0.579

-0.103

Ethambutol3

0.443

0.482

Meropenem3

0.585

-0.297

Vancomycin16

-1.618

0.196

Rv2680_day32

-2.622

-1.569

H37Rv_KO_MarP

0.154

0.945

hypoxia_3wks

-2.245

-0.148

hypoxia_6wks

-1.775

-0.077

glycerol

-0.644

-0.164

cholesterol

0.187

0.305

AJ

-0.593

-0.018

Bibs02

-0.177

0.315

Bibs02c

0.564

0.809

BL6

-1.665

0.524

BL6a

-0.135

0.164

BXD01

-2.356

-0.244

BXD010

-1.432

-1.959

BXD011

-2.162

-0.389

BXD03

-1.56

-0.254

BXD04

-1.175

-0.1

BXD05

-2.129

-2.153

BXD06

-0.68

-0.737

BXD07

-2.678

-0.94

BXD08

-1.812

-0.617

BXD09

-2.243

-1.132

CAST

1.22

0.988

CCcont

-1.155

-1.334

DS01

0.525

0.327

DS02

1.237

-0.555

DS04

0.51

-0.077

DS0c

0.262

0.132

GP01

-2.14

-1.865

GP02

-1.727

-2.029

GP0c

-2.005

-0.788

NOD

0.667

-0.089

NZO

-0.328

-0.079

PWK

1.635

0.672

H37Rv_KO_CtpC

0.039

-0.773

H37Rv_KO_CtpD

-1.019

-0.666

H37Rv_KO_Rv1272

-1.985

-1.642

H37Rv_KO_SugABC

-2.245

-0.064

H37Rv_KO_MbtN

-1.936

-1.224

Trans05

-1.531

-2.468

macrophage_unactivated

-0.521

1.184

IL1

-2.966

-0.347

Rapamycin

-2.836

-0.921

Tcell

2.538

0.215

GMCSF

-2.852

-0.441

IFNab

-2.074

-0.583

IFNg

-3.889

-0.446

IFNg_GMCSF1

-2.46

-1.119

Rv1432_day32

-2.581

0.0

Rv1565c_day32

-1.696

-0.482

secA2_input

-0.654

0.772

delta_Rv3594

-2.643

-1.016

delta_Rv3717

-1.184

-0.703

delta_Rv3811

-2.791

-0.617

delta_Rv0954

0.0

0.19

PonA1

0.386

-1.506

EccD1_KO

0.253

0.786

EspI_KO

0.157

0.0

PE35_KO

0.583

0.767

PPE68_KO

0.0

1.488

glycerol2

-1.113

-0.028

lignocerate

-0.117

0.425

oleate

1.029

0.474

phosphatidylcholine

0.482

0.595

acetate

1.13

0.033

glucAc

0.785

0.099

Rv0950ko

0.362

0.268

Rv1096ko

0.293

1.252

Rv3684ko

-0.252

0.291

delta_otsA_trehalose

0.0

1.215