Top 10 genes with highest correlation to Rv1192/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1974/- | (cc=0.657) | info on Rv1974/- |
| Rv0887c/- | (cc=0.6546) | info on Rv0887c/- |
| Rv3482c/- | (cc=0.641) | info on Rv3482c/- |
| Rv3737/- | (cc=0.6053) | info on Rv3737/- |
| Rv0850/- | (cc=0.6035) | info on Rv0850/- |
| Rv2669/- | (cc=0.6029) | info on Rv2669/- |
| Rv0856/- | (cc=0.6024) | info on Rv0856/- |
| Rv3641c/fic | (cc=0.6006) | info on Rv3641c/fic |
| Rv3606c/folK | (cc=0.5906) | info on Rv3606c/folK |
| Rv0614/- | (cc=0.5869) | info on Rv0614/- |
Correlation of Rv1192/- with Rv3737/-
Normalized LFCs for Rv1192/-:
(description and provenance of datasets)
| Rv1192/- | Rv3737/- | |
| Fe_supp_jason_reseq | 1.031 | 0.935 |
| low_pH_jason_reseq | -1.225 | 0.0 |
| NO_jason_reseq | -0.189 | -0.058 |
| B6_jason_reseq | 1.83 | 0.593 |
| MHCII_jason_reseq | 1.815 | 0.998 |
| Isoniazid02 | 0.377 | 0.441 |
| Rifampicin4 | -0.125 | -0.317 |
| Ethambutol3 | 1.46 | 0.045 |
| Meropenem3 | 1.205 | 3.291 |
| Vancomycin16 | 0.119 | 0.512 |
| Rv2680_day32 | 1.037 | -0.289 |
| H37Rv_KO_MarP | 0.203 | -0.336 |
| hypoxia_3wks | -0.861 | -1.483 |
| hypoxia_6wks | -1.207 | -2.326 |
| glycerol | -1.119 | -0.157 |
| cholesterol | -0.023 | 0.068 |
| AJ | 0.266 | -1.336 |
| Bibs02 | 0.485 | 0.584 |
| Bibs02c | 0.377 | -0.527 |
| BL6 | -0.701 | -0.767 |
| BL6a | -0.218 | -0.834 |
| BXD01 | -0.434 | -1.421 |
| BXD010 | -1.013 | -0.713 |
| BXD011 | -0.527 | -1.021 |
| BXD03 | -0.481 | -1.517 |
| BXD04 | -0.115 | -1.368 |
| BXD05 | -1.431 | -1.351 |
| BXD06 | -0.467 | -1.652 |
| BXD07 | -0.623 | -1.226 |
| BXD08 | -0.793 | -0.647 |
| BXD09 | -0.899 | -1.018 |
| CAST | 0.469 | -0.726 |
| CCcont | -0.592 | -0.594 |
| DS01 | 1.167 | 0.52 |
| DS02 | 0.429 | 0.572 |
| DS04 | 1.526 | 0.55 |
| DS0c | 0.947 | 0.057 |
| GP01 | -0.602 | -0.715 |
| GP02 | 0.033 | -0.434 |
| GP0c | -1.353 | -1.399 |
| NOD | 0.731 | -0.226 |
| NZO | 0.025 | -0.889 |
| PWK | 0.374 | -1.485 |
| H37Rv_KO_CtpC | -0.644 | -0.997 |
| H37Rv_KO_CtpD | -0.502 | 0.117 |
| H37Rv_KO_Rv1272 | -0.653 | -0.723 |
| H37Rv_KO_SugABC | -0.293 | -0.718 |
| H37Rv_KO_MbtN | -1.325 | -0.239 |
| Trans05 | -0.495 | -0.593 |
| macrophage_unactivated | 0.092 | -1.026 |
| IL1 | -0.329 | -0.454 |
| Rapamycin | -1.04 | -0.724 |
| Tcell | 0.248 | -1.642 |
| GMCSF | -0.465 | -0.623 |
| IFNab | -0.305 | -0.063 |
| IFNg | -0.81 | -0.973 |
| IFNg_GMCSF1 | -0.418 | -0.201 |
| Rv1432_day32 | -0.92 | -0.618 |
| Rv1565c_day32 | -0.573 | -0.232 |
| secA2_input | -0.177 | -0.388 |
| delta_Rv3594 | 0.659 | -0.028 |
| delta_Rv3717 | 0.02 | -0.164 |
| delta_Rv3811 | 0.946 | 0.696 |
| delta_Rv0954 | 1.187 | 1.315 |
| PonA1 | 0.372 | 1.571 |
| EccD1_KO | -0.957 | -0.286 |
| EspI_KO | -0.2 | -1.323 |
| PE35_KO | -0.277 | -1.744 |
| PPE68_KO | -0.035 | -1.673 |
| glycerol2 | 0.935 | 0.551 |
| lignocerate | 1.103 | 0.455 |
| oleate | 0.669 | 0.637 |
| phosphatidylcholine | 1.139 | 0.468 |
| acetate | 0.618 | 0.161 |
| glucAc | 0.666 | 0.0 |
| Rv0950ko | 0.648 | 0.365 |
| Rv1096ko | 0.682 | -0.353 |
| Rv3684ko | 0.383 | -0.586 |
| delta_otsA_trehalose | -0.476 | 0.439 |