Top 10 genes with highest correlation to Rv1192/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1974/- | (cc=0.657) | info on Rv1974/- |
| Rv0887c/- | (cc=0.6546) | info on Rv0887c/- |
| Rv3482c/- | (cc=0.641) | info on Rv3482c/- |
| Rv3737/- | (cc=0.6053) | info on Rv3737/- |
| Rv0850/- | (cc=0.6035) | info on Rv0850/- |
| Rv2669/- | (cc=0.6029) | info on Rv2669/- |
| Rv0856/- | (cc=0.6024) | info on Rv0856/- |
| Rv3641c/fic | (cc=0.6006) | info on Rv3641c/fic |
| Rv3606c/folK | (cc=0.5906) | info on Rv3606c/folK |
| Rv0614/- | (cc=0.5869) | info on Rv0614/- |
Correlation of Rv1192/- with Rv3482c/-
Normalized LFCs for Rv1192/-:
(description and provenance of datasets)
| Rv1192/- | Rv3482c/- | |
| Fe_supp_jason_reseq | 1.031 | 0.543 |
| low_pH_jason_reseq | -1.225 | -1.541 |
| NO_jason_reseq | -0.189 | -0.218 |
| B6_jason_reseq | 1.83 | 0.878 |
| MHCII_jason_reseq | 1.815 | 1.276 |
| Isoniazid02 | 0.377 | 0.618 |
| Rifampicin4 | -0.125 | 0.079 |
| Ethambutol3 | 1.46 | 1.654 |
| Meropenem3 | 1.205 | 0.551 |
| Vancomycin16 | 0.119 | 0.56 |
| Rv2680_day32 | 1.037 | -0.738 |
| H37Rv_KO_MarP | 0.203 | 0.226 |
| hypoxia_3wks | -0.861 | -0.323 |
| hypoxia_6wks | -1.207 | 0.106 |
| glycerol | -1.119 | 0.177 |
| cholesterol | -0.023 | -0.377 |
| AJ | 0.266 | -0.928 |
| Bibs02 | 0.485 | 0.008 |
| Bibs02c | 0.377 | 0.291 |
| BL6 | -0.701 | -0.82 |
| BL6a | -0.218 | -0.484 |
| BXD01 | -0.434 | -0.936 |
| BXD010 | -1.013 | -1.38 |
| BXD011 | -0.527 | -1.176 |
| BXD03 | -0.481 | -0.528 |
| BXD04 | -0.115 | -0.672 |
| BXD05 | -1.431 | -0.741 |
| BXD06 | -0.467 | -1.019 |
| BXD07 | -0.623 | -0.989 |
| BXD08 | -0.793 | -1.268 |
| BXD09 | -0.899 | -0.954 |
| CAST | 0.469 | -1.069 |
| CCcont | -0.592 | -0.282 |
| DS01 | 1.167 | 0.118 |
| DS02 | 0.429 | -0.013 |
| DS04 | 1.526 | 0.195 |
| DS0c | 0.947 | 0.437 |
| GP01 | -0.602 | -1.843 |
| GP02 | 0.033 | -1.339 |
| GP0c | -1.353 | -1.004 |
| NOD | 0.731 | 0.133 |
| NZO | 0.025 | -1.063 |
| PWK | 0.374 | -0.561 |
| H37Rv_KO_CtpC | -0.644 | -1.153 |
| H37Rv_KO_CtpD | -0.502 | -0.654 |
| H37Rv_KO_Rv1272 | -0.653 | -1.053 |
| H37Rv_KO_SugABC | -0.293 | -0.183 |
| H37Rv_KO_MbtN | -1.325 | -0.656 |
| Trans05 | -0.495 | -0.866 |
| macrophage_unactivated | 0.092 | -0.357 |
| IL1 | -0.329 | -0.3 |
| Rapamycin | -1.04 | 0.261 |
| Tcell | 0.248 | -0.052 |
| GMCSF | -0.465 | 0.209 |
| IFNab | -0.305 | -0.342 |
| IFNg | -0.81 | -0.013 |
| IFNg_GMCSF1 | -0.418 | -0.016 |
| Rv1432_day32 | -0.92 | -0.18 |
| Rv1565c_day32 | -0.573 | -0.313 |
| secA2_input | -0.177 | 0.304 |
| delta_Rv3594 | 0.659 | 0.381 |
| delta_Rv3717 | 0.02 | 0.235 |
| delta_Rv3811 | 0.946 | 0.128 |
| delta_Rv0954 | 1.187 | -0.08 |
| PonA1 | 0.372 | 0.578 |
| EccD1_KO | -0.957 | -0.171 |
| EspI_KO | -0.2 | -0.148 |
| PE35_KO | -0.277 | -0.28 |
| PPE68_KO | -0.035 | 0.08 |
| glycerol2 | 0.935 | 0.846 |
| lignocerate | 1.103 | 1.085 |
| oleate | 0.669 | 0.096 |
| phosphatidylcholine | 1.139 | 1.088 |
| acetate | 0.618 | 0.316 |
| glucAc | 0.666 | 0.38 |
| Rv0950ko | 0.648 | 0.458 |
| Rv1096ko | 0.682 | 0.157 |
| Rv3684ko | 0.383 | -0.491 |
| delta_otsA_trehalose | -0.476 | -1.133 |