Top 10 genes with highest correlation to Rv1192/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1974/- | (cc=0.657) | info on Rv1974/- |
| Rv0887c/- | (cc=0.6546) | info on Rv0887c/- |
| Rv3482c/- | (cc=0.641) | info on Rv3482c/- |
| Rv3737/- | (cc=0.6053) | info on Rv3737/- |
| Rv0850/- | (cc=0.6035) | info on Rv0850/- |
| Rv2669/- | (cc=0.6029) | info on Rv2669/- |
| Rv0856/- | (cc=0.6024) | info on Rv0856/- |
| Rv3641c/fic | (cc=0.6006) | info on Rv3641c/fic |
| Rv3606c/folK | (cc=0.5906) | info on Rv3606c/folK |
| Rv0614/- | (cc=0.5869) | info on Rv0614/- |
Correlation of Rv1192/- with Rv0887c/-
Normalized LFCs for Rv1192/-:
(description and provenance of datasets)
| Rv1192/- | Rv0887c/- | |
| Fe_supp_jason_reseq | 1.031 | 0.415 |
| low_pH_jason_reseq | -1.225 | -0.599 |
| NO_jason_reseq | -0.189 | 2.392 |
| B6_jason_reseq | 1.83 | 2.335 |
| MHCII_jason_reseq | 1.815 | 2.223 |
| Isoniazid02 | 0.377 | 0.304 |
| Rifampicin4 | -0.125 | 0.051 |
| Ethambutol3 | 1.46 | -0.381 |
| Meropenem3 | 1.205 | 0.781 |
| Vancomycin16 | 0.119 | 1.666 |
| Rv2680_day32 | 1.037 | -0.413 |
| H37Rv_KO_MarP | 0.203 | 0.0 |
| hypoxia_3wks | -0.861 | -1.475 |
| hypoxia_6wks | -1.207 | -0.382 |
| glycerol | -1.119 | 0.541 |
| cholesterol | -0.023 | 0.71 |
| AJ | 0.266 | 0.138 |
| Bibs02 | 0.485 | 0.0 |
| Bibs02c | 0.377 | 1.035 |
| BL6 | -0.701 | -0.935 |
| BL6a | -0.218 | 0.36 |
| BXD01 | -0.434 | -0.542 |
| BXD010 | -1.013 | -2.717 |
| BXD011 | -0.527 | -1.316 |
| BXD03 | -0.481 | -2.012 |
| BXD04 | -0.115 | -0.048 |
| BXD05 | -1.431 | -0.545 |
| BXD06 | -0.467 | -1.152 |
| BXD07 | -0.623 | -1.677 |
| BXD08 | -0.793 | -1.219 |
| BXD09 | -0.899 | -1.702 |
| CAST | 0.469 | 0.185 |
| CCcont | -0.592 | 0.183 |
| DS01 | 1.167 | 0.577 |
| DS02 | 0.429 | 1.712 |
| DS04 | 1.526 | 0.087 |
| DS0c | 0.947 | 1.684 |
| GP01 | -0.602 | -1.0 |
| GP02 | 0.033 | -1.673 |
| GP0c | -1.353 | -0.714 |
| NOD | 0.731 | -0.412 |
| NZO | 0.025 | -0.785 |
| PWK | 0.374 | 0.24 |
| H37Rv_KO_CtpC | -0.644 | 0.061 |
| H37Rv_KO_CtpD | -0.502 | -1.885 |
| H37Rv_KO_Rv1272 | -0.653 | -0.464 |
| H37Rv_KO_SugABC | -0.293 | 0.306 |
| H37Rv_KO_MbtN | -1.325 | -1.749 |
| Trans05 | -0.495 | -3.216 |
| macrophage_unactivated | 0.092 | -1.098 |
| IL1 | -0.329 | -0.572 |
| Rapamycin | -1.04 | -3.397 |
| Tcell | 0.248 | 0.401 |
| GMCSF | -0.465 | -0.668 |
| IFNab | -0.305 | -1.466 |
| IFNg | -0.81 | -2.673 |
| IFNg_GMCSF1 | -0.418 | -1.304 |
| Rv1432_day32 | -0.92 | 0.0 |
| Rv1565c_day32 | -0.573 | -0.398 |
| secA2_input | -0.177 | -1.461 |
| delta_Rv3594 | 0.659 | 1.337 |
| delta_Rv3717 | 0.02 | 1.495 |
| delta_Rv3811 | 0.946 | 3.062 |
| delta_Rv0954 | 1.187 | 2.013 |
| PonA1 | 0.372 | 2.604 |
| EccD1_KO | -0.957 | -0.895 |
| EspI_KO | -0.2 | -0.776 |
| PE35_KO | -0.277 | 0.831 |
| PPE68_KO | -0.035 | -0.374 |
| glycerol2 | 0.935 | 2.844 |
| lignocerate | 1.103 | 3.288 |
| oleate | 0.669 | -0.179 |
| phosphatidylcholine | 1.139 | 2.962 |
| acetate | 0.618 | 3.586 |
| glucAc | 0.666 | 2.946 |
| Rv0950ko | 0.648 | 1.251 |
| Rv1096ko | 0.682 | 1.921 |
| Rv3684ko | 0.383 | 1.294 |
| delta_otsA_trehalose | -0.476 | -1.092 |