Top 10 genes with highest correlation to Rv1184c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1185c/fadD21 | (cc=0.6345) | info on Rv1185c/fadD21 |
| Rv1181/pks4 | (cc=0.6342) | info on Rv1181/pks4 |
| Rv3822/- | (cc=0.578) | info on Rv3822/- |
| Rv2328/PE23 | (cc=0.5774) | info on Rv2328/PE23 |
| Rv3482c/- | (cc=0.575) | info on Rv3482c/- |
| Rv2651c/- | (cc=0.5656) | info on Rv2651c/- |
| Rv0071/- | (cc=0.5614) | info on Rv0071/- |
| Rv0010c/- | (cc=0.5359) | info on Rv0010c/- |
| Rv0012/- | (cc=0.5327) | info on Rv0012/- |
| Rv0006/gyrA | (cc=0.5312) | info on Rv0006/gyrA |
Correlation of Rv1184c/- with Rv1181/pks4
Normalized LFCs for Rv1184c/-:
(description and provenance of datasets)
| Rv1184c/- | Rv1181/pks4 | |
| Fe_supp_jason_reseq | 1.708 | -0.508 |
| low_pH_jason_reseq | -0.694 | 0.179 |
| NO_jason_reseq | -0.399 | -0.564 |
| B6_jason_reseq | 1.187 | 1.952 |
| MHCII_jason_reseq | 1.676 | 2.203 |
| Isoniazid02 | -0.202 | 0.244 |
| Rifampicin4 | -1.335 | -0.165 |
| Ethambutol3 | -0.734 | 0.687 |
| Meropenem3 | -0.83 | 0.137 |
| Vancomycin16 | -0.316 | 0.255 |
| Rv2680_day32 | 0.241 | -0.253 |
| H37Rv_KO_MarP | 0.185 | 0.21 |
| hypoxia_3wks | 0.223 | -0.283 |
| hypoxia_6wks | -0.265 | -0.088 |
| glycerol | -0.443 | 0.721 |
| cholesterol | -0.372 | 0.512 |
| AJ | -0.953 | 0.508 |
| Bibs02 | -0.114 | 0.011 |
| Bibs02c | -0.62 | -0.035 |
| BL6 | -1.109 | -1.076 |
| BL6a | -1.478 | -0.562 |
| BXD01 | -2.236 | -2.015 |
| BXD010 | -1.344 | -0.893 |
| BXD011 | -1.279 | -1.018 |
| BXD03 | -1.588 | -1.344 |
| BXD04 | -1.554 | -1.303 |
| BXD05 | -0.796 | -0.967 |
| BXD06 | -1.975 | -1.624 |
| BXD07 | -1.52 | -1.523 |
| BXD08 | -1.833 | -1.691 |
| BXD09 | -1.349 | -1.545 |
| CAST | -1.8 | -0.025 |
| CCcont | -0.784 | -1.157 |
| DS01 | -0.443 | 0.026 |
| DS02 | -0.057 | -0.098 |
| DS04 | -0.898 | -0.468 |
| DS0c | 0.162 | -0.061 |
| GP01 | -1.674 | -1.655 |
| GP02 | -1.879 | -1.466 |
| GP0c | -2.176 | -1.95 |
| NOD | -0.771 | 0.259 |
| NZO | -1.12 | 0.107 |
| PWK | -1.189 | 0.638 |
| H37Rv_KO_CtpC | -1.612 | -1.24 |
| H37Rv_KO_CtpD | -1.315 | -1.259 |
| H37Rv_KO_Rv1272 | -1.713 | -1.596 |
| H37Rv_KO_SugABC | -1.303 | -0.505 |
| H37Rv_KO_MbtN | -0.742 | -0.472 |
| Trans05 | -0.537 | -0.869 |
| macrophage_unactivated | -1.654 | -1.973 |
| IL1 | 1.584 | -0.169 |
| Rapamycin | 0.822 | 0.034 |
| Tcell | -1.978 | -2.512 |
| GMCSF | -0.293 | -1.838 |
| IFNab | 0.698 | -0.822 |
| IFNg | -0.297 | -0.764 |
| IFNg_GMCSF1 | 0.097 | -0.77 |
| Rv1432_day32 | -1.902 | -0.459 |
| Rv1565c_day32 | 0.212 | -0.63 |
| secA2_input | -0.603 | -0.373 |
| delta_Rv3594 | 0.724 | 0.416 |
| delta_Rv3717 | 0.131 | -0.106 |
| delta_Rv3811 | -0.462 | 0.193 |
| delta_Rv0954 | 0.487 | -0.305 |
| PonA1 | 0.634 | -0.235 |
| EccD1_KO | -2.424 | -0.776 |
| EspI_KO | -0.516 | -0.673 |
| PE35_KO | -1.502 | -0.16 |
| PPE68_KO | -1.245 | -0.269 |
| glycerol2 | 0.247 | -0.144 |
| lignocerate | 0.485 | 1.277 |
| oleate | -1.168 | -0.865 |
| phosphatidylcholine | -0.511 | -0.024 |
| acetate | 0.389 | 0.309 |
| glucAc | 0.035 | 0.363 |
| Rv0950ko | -0.196 | -0.084 |
| Rv1096ko | 0.401 | 1.294 |
| Rv3684ko | -0.573 | 0.265 |
| delta_otsA_trehalose | 0.206 | 1.196 |