Top 10 genes with highest correlation to Rv1184c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1185c/fadD21 | (cc=0.6345) | info on Rv1185c/fadD21 |
| Rv1181/pks4 | (cc=0.6342) | info on Rv1181/pks4 |
| Rv3822/- | (cc=0.578) | info on Rv3822/- |
| Rv2328/PE23 | (cc=0.5774) | info on Rv2328/PE23 |
| Rv3482c/- | (cc=0.575) | info on Rv3482c/- |
| Rv2651c/- | (cc=0.5656) | info on Rv2651c/- |
| Rv0071/- | (cc=0.5614) | info on Rv0071/- |
| Rv0010c/- | (cc=0.5359) | info on Rv0010c/- |
| Rv0012/- | (cc=0.5327) | info on Rv0012/- |
| Rv0006/gyrA | (cc=0.5312) | info on Rv0006/gyrA |
Correlation of Rv1184c/- with Rv0071/-
Normalized LFCs for Rv1184c/-:
(description and provenance of datasets)
| Rv1184c/- | Rv0071/- | |
| Fe_supp_jason_reseq | 1.708 | 0.624 |
| low_pH_jason_reseq | -0.694 | -0.139 |
| NO_jason_reseq | -0.399 | 0.517 |
| B6_jason_reseq | 1.187 | 1.764 |
| MHCII_jason_reseq | 1.676 | 1.675 |
| Isoniazid02 | -0.202 | 0.073 |
| Rifampicin4 | -1.335 | 0.75 |
| Ethambutol3 | -0.734 | 1.131 |
| Meropenem3 | -0.83 | 0.694 |
| Vancomycin16 | -0.316 | 0.218 |
| Rv2680_day32 | 0.241 | 1.537 |
| H37Rv_KO_MarP | 0.185 | 0.059 |
| hypoxia_3wks | 0.223 | -0.152 |
| hypoxia_6wks | -0.265 | -0.182 |
| glycerol | -0.443 | 1.16 |
| cholesterol | -0.372 | 1.207 |
| AJ | -0.953 | -0.504 |
| Bibs02 | -0.114 | 0.474 |
| Bibs02c | -0.62 | 0.887 |
| BL6 | -1.109 | 0.441 |
| BL6a | -1.478 | -0.265 |
| BXD01 | -2.236 | -0.919 |
| BXD010 | -1.344 | -0.781 |
| BXD011 | -1.279 | -0.745 |
| BXD03 | -1.588 | -1.044 |
| BXD04 | -1.554 | -0.664 |
| BXD05 | -0.796 | -0.091 |
| BXD06 | -1.975 | -0.636 |
| BXD07 | -1.52 | -0.722 |
| BXD08 | -1.833 | -0.8 |
| BXD09 | -1.349 | -0.69 |
| CAST | -1.8 | 0.235 |
| CCcont | -0.784 | -0.342 |
| DS01 | -0.443 | 0.301 |
| DS02 | -0.057 | 0.767 |
| DS04 | -0.898 | 0.51 |
| DS0c | 0.162 | -0.093 |
| GP01 | -1.674 | -2.601 |
| GP02 | -1.879 | -2.703 |
| GP0c | -2.176 | -1.661 |
| NOD | -0.771 | 1.694 |
| NZO | -1.12 | 0.027 |
| PWK | -1.189 | 0.443 |
| H37Rv_KO_CtpC | -1.612 | 0.0 |
| H37Rv_KO_CtpD | -1.315 | 0.247 |
| H37Rv_KO_Rv1272 | -1.713 | -0.757 |
| H37Rv_KO_SugABC | -1.303 | -0.655 |
| H37Rv_KO_MbtN | -0.742 | -0.546 |
| Trans05 | -0.537 | -0.911 |
| macrophage_unactivated | -1.654 | 0.085 |
| IL1 | 1.584 | 0.181 |
| Rapamycin | 0.822 | 0.779 |
| Tcell | -1.978 | -0.088 |
| GMCSF | -0.293 | 0.671 |
| IFNab | 0.698 | -0.366 |
| IFNg | -0.297 | -0.171 |
| IFNg_GMCSF1 | 0.097 | 0.776 |
| Rv1432_day32 | -1.902 | 0.426 |
| Rv1565c_day32 | 0.212 | 1.978 |
| secA2_input | -0.603 | 1.85 |
| delta_Rv3594 | 0.724 | -0.136 |
| delta_Rv3717 | 0.131 | -0.409 |
| delta_Rv3811 | -0.462 | -0.201 |
| delta_Rv0954 | 0.487 | 0.828 |
| PonA1 | 0.634 | 0.177 |
| EccD1_KO | -2.424 | -1.727 |
| EspI_KO | -0.516 | -1.931 |
| PE35_KO | -1.502 | -1.248 |
| PPE68_KO | -1.245 | -1.017 |
| glycerol2 | 0.247 | 0.422 |
| lignocerate | 0.485 | 0.559 |
| oleate | -1.168 | -0.903 |
| phosphatidylcholine | -0.511 | 0.172 |
| acetate | 0.389 | 0.321 |
| glucAc | 0.035 | 0.587 |
| Rv0950ko | -0.196 | 0.066 |
| Rv1096ko | 0.401 | 0.709 |
| Rv3684ko | -0.573 | -0.072 |
| delta_otsA_trehalose | 0.206 | 1.156 |