Top 10 genes with highest correlation to Rv1178/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0712/- | (cc=0.5838) | info on Rv0712/- |
| Rv0135c/- | (cc=0.5218) | info on Rv0135c/- |
| Rv3855/ethR | (cc=0.5201) | info on Rv3855/ethR |
| Rv1592c/- | (cc=0.4935) | info on Rv1592c/- |
| Rv3068c/pgmA | (cc=0.4906) | info on Rv3068c/pgmA |
| Rv0400c/fadE7 | (cc=0.4875) | info on Rv0400c/fadE7 |
| Rv2379c/mbtF | (cc=0.4873) | info on Rv2379c/mbtF |
| Rv1020/mfd | (cc=0.478) | info on Rv1020/mfd |
| Rv2908c/- | (cc=0.4766) | info on Rv2908c/- |
| Rv0904c/accD3 | (cc=0.471) | info on Rv0904c/accD3 |
Correlation of Rv1178/- with Rv3855/ethR
Normalized LFCs for Rv1178/-:
(description and provenance of datasets)
| Rv1178/- | Rv3855/ethR | |
| Fe_supp_jason_reseq | -1.039 | 1.219 |
| low_pH_jason_reseq | 0.527 | 2.111 |
| NO_jason_reseq | -5.222 | -6.0 |
| B6_jason_reseq | -1.36 | 0.077 |
| MHCII_jason_reseq | -2.581 | -0.624 |
| Isoniazid02 | -1.072 | -0.982 |
| Rifampicin4 | -0.523 | -0.13 |
| Ethambutol3 | 1.677 | 0.316 |
| Meropenem3 | 1.154 | -0.058 |
| Vancomycin16 | -0.976 | 0.324 |
| Rv2680_day32 | -2.122 | -0.235 |
| H37Rv_KO_MarP | 3.838 | 0.937 |
| hypoxia_3wks | -4.625 | -1.065 |
| hypoxia_6wks | -2.422 | -1.539 |
| glycerol | 1.631 | 1.147 |
| cholesterol | 1.675 | 0.823 |
| AJ | -0.585 | -0.904 |
| Bibs02 | -0.294 | -0.759 |
| Bibs02c | -0.277 | 0.27 |
| BL6 | -0.53 | 0.852 |
| BL6a | 0.049 | 0.917 |
| BXD01 | -0.458 | 0.56 |
| BXD010 | -0.065 | -0.669 |
| BXD011 | -0.243 | -0.044 |
| BXD03 | -0.573 | 1.047 |
| BXD04 | 0.117 | 0.586 |
| BXD05 | -0.975 | -0.491 |
| BXD06 | -0.337 | -0.554 |
| BXD07 | 0.034 | 0.114 |
| BXD08 | -0.422 | -0.17 |
| BXD09 | -0.494 | -0.049 |
| CAST | -0.654 | 0.622 |
| CCcont | 1.517 | 0.962 |
| DS01 | -0.83 | -0.168 |
| DS02 | -0.288 | -0.692 |
| DS04 | 0.0 | 0.19 |
| DS0c | -1.268 | 0.614 |
| GP01 | -0.382 | 0.58 |
| GP02 | -0.839 | -0.122 |
| GP0c | -0.551 | -0.413 |
| NOD | -0.789 | 0.076 |
| NZO | 0.405 | -0.777 |
| PWK | -1.326 | -0.25 |
| H37Rv_KO_CtpC | 0.329 | -0.717 |
| H37Rv_KO_CtpD | 0.061 | 1.605 |
| H37Rv_KO_Rv1272 | -0.109 | -1.375 |
| H37Rv_KO_SugABC | 0.138 | -0.292 |
| H37Rv_KO_MbtN | -0.558 | -0.598 |
| Trans05 | 0.0 | 0.087 |
| macrophage_unactivated | 0.609 | -0.713 |
| IL1 | 0.463 | -0.872 |
| Rapamycin | 1.114 | -1.513 |
| Tcell | 0.388 | -0.254 |
| GMCSF | -1.436 | -1.03 |
| IFNab | -1.297 | -0.683 |
| IFNg | -1.0 | -0.724 |
| IFNg_GMCSF1 | 0.49 | -0.924 |
| Rv1432_day32 | -1.602 | -2.109 |
| Rv1565c_day32 | -3.533 | 0.359 |
| secA2_input | -0.205 | -0.351 |
| delta_Rv3594 | -0.199 | -0.852 |
| delta_Rv3717 | -1.602 | -1.787 |
| delta_Rv3811 | -1.344 | -1.924 |
| delta_Rv0954 | 2.212 | -0.093 |
| PonA1 | 1.711 | 0.016 |
| EccD1_KO | 0.47 | 0.385 |
| EspI_KO | 0.485 | -0.482 |
| PE35_KO | 0.723 | -0.111 |
| PPE68_KO | 0.873 | -0.608 |
| glycerol2 | -1.789 | -4.603 |
| lignocerate | -2.153 | -4.506 |
| oleate | -2.105 | -2.48 |
| phosphatidylcholine | -2.899 | -5.472 |
| acetate | -0.888 | -0.206 |
| glucAc | -0.754 | -0.711 |
| Rv0950ko | 3.745 | 0.235 |
| Rv1096ko | 2.569 | -0.06 |
| Rv3684ko | 3.871 | -0.033 |
| delta_otsA_trehalose | 0.415 | 1.297 |