TnSeqCorr

Top 10 genes with highest correlation to Rv1173/fbiC:

update plotcorrelationlink to info on gene
Rv3262/fbiB (cc=0.7971) info on Rv3262/fbiB
Rv3261/fbiA (cc=0.753) info on Rv3261/fbiA
Rv2983/- (cc=0.745) info on Rv2983/-
Rv0860/fadB (cc=0.6757) info on Rv0860/fadB
Rv3624c/hpt (cc=0.6639) info on Rv3624c/hpt
Rv0392c/ndhA (cc=0.6551) info on Rv0392c/ndhA
Rv1908c/katG (cc=0.628) info on Rv1908c/katG
Rv3193c/- (cc=0.6258) info on Rv3193c/-
Rv2909c/rpsP (cc=0.6257) info on Rv2909c/rpsP
Rv2543/lppA (cc=0.5912) info on Rv2543/lppA

Correlation of Rv1173/fbiC with Rv3262/fbiB

Normalized LFCs for Rv1173/fbiC:
(description and provenance of datasets)
Rv1173/fbiCRv3262/fbiB
Fe_supp_jason_reseq

0.8

0.598

low_pH_jason_reseq

0.124

0.0

NO_jason_reseq

-0.42

0.0

B6_jason_reseq

0.16

0.0

MHCII_jason_reseq

0.27

0.0

Isoniazid02

2.424

3.152

Rifampicin4

0.931

1.018

Ethambutol3

1.147

0.457

Meropenem3

1.23

0.376

Vancomycin16

0.546

0.833

Rv2680_day32

-1.189

0.359

H37Rv_KO_MarP

-0.412

-0.55

hypoxia_3wks

-0.478

-0.77

hypoxia_6wks

-1.539

-1.13

glycerol

1.128

1.758

cholesterol

0.583

1.663

AJ

0.513

0.0

Bibs02

0.0

0.348

Bibs02c

0.355

0.0

BL6

-0.456

0.0

BL6a

0.336

0.198

BXD01

0.151

0.0

BXD010

-0.168

0.0

BXD011

-0.167

0.0

BXD03

0.08

0.135

BXD04

-0.347

0.0

BXD05

-0.176

0.135

BXD06

0.155

0.366

BXD07

0.373

0.0

BXD08

-0.485

0.0

BXD09

0.163

0.14

CAST

-0.302

0.23

CCcont

1.832

1.815

DS01

1.783

2.262

DS02

1.134

0.597

DS04

1.834

0.194

DS0c

1.287

1.204

GP01

-0.548

0.0

GP02

-0.462

0.0

GP0c

-0.591

0.0

NOD

-0.295

0.225

NZO

-0.262

0.0

PWK

-0.398

0.0

H37Rv_KO_CtpC

0.785

0.0

H37Rv_KO_CtpD

1.374

0.348

H37Rv_KO_Rv1272

0.445

0.0

H37Rv_KO_SugABC

0.168

0.189

H37Rv_KO_MbtN

0.866

0.362

Trans05

0.631

0.0

macrophage_unactivated

0.783

0.436

IL1

0.258

0.0

Rapamycin

0.0

0.0

Tcell

0.554

0.0

GMCSF

1.035

0.0

IFNab

0.0

0.0

IFNg

-0.516

0.0

IFNg_GMCSF1

0.534

0.0

Rv1432_day32

-0.164

0.0

Rv1565c_day32

0.986

1.339

secA2_input

-1.154

-1.05

delta_Rv3594

0.422

-0.225

delta_Rv3717

-1.688

-1.201

delta_Rv3811

0.457

-0.143

delta_Rv0954

1.388

0.61

PonA1

0.919

0.955

EccD1_KO

-1.273

-0.753

EspI_KO

-0.516

-1.609

PE35_KO

1.508

0.89

PPE68_KO

0.595

0.864

glycerol2

-1.645

-1.178

lignocerate

-3.039

-2.242

oleate

-2.915

-2.61

phosphatidylcholine

-3.808

-2.755

acetate

0.203

0.161

glucAc

-0.246

-0.587

Rv0950ko

-0.546

0.498

Rv1096ko

-1.034

1.348

Rv3684ko

-1.055

0.668

delta_otsA_trehalose

0.414

0.595