Top 10 genes with highest correlation to Rv1147/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2505c/fadD35 | (cc=0.5326) | info on Rv2505c/fadD35 |
| Rv2504c/scoA | (cc=0.4527) | info on Rv2504c/scoA |
| Rv1424c/- | (cc=0.4204) | info on Rv1424c/- |
| Rv2136c/- | (cc=0.417) | info on Rv2136c/- |
| Rv2820c/- | (cc=0.4123) | info on Rv2820c/- |
| Rv2295/- | (cc=0.4111) | info on Rv2295/- |
| Rv3730c/- | (cc=0.4053) | info on Rv3730c/- |
| Rv1215c/- | (cc=0.3918) | info on Rv1215c/- |
| Rv2424c/- | (cc=0.3876) | info on Rv2424c/- |
| Rv1768/PE_PGRS31 | (cc=0.3851) | info on Rv1768/PE_PGRS31 |
Correlation of Rv1147/- with Rv2504c/scoA
Normalized LFCs for Rv1147/-:
(description and provenance of datasets)
| Rv1147/- | Rv2504c/scoA | |
| Fe_supp_jason_reseq | -0.039 | -0.328 |
| low_pH_jason_reseq | -0.368 | -0.776 |
| NO_jason_reseq | -0.131 | 0.131 |
| B6_jason_reseq | -0.353 | -0.721 |
| MHCII_jason_reseq | -0.281 | -0.008 |
| Isoniazid02 | 0.326 | 0.0 |
| Rifampicin4 | 0.536 | 0.0 |
| Ethambutol3 | 2.456 | 2.285 |
| Meropenem3 | -0.47 | 1.282 |
| Vancomycin16 | 0.478 | 0.446 |
| Rv2680_day32 | -0.257 | 0.02 |
| H37Rv_KO_MarP | 0.316 | -0.409 |
| hypoxia_3wks | 0.475 | 0.638 |
| hypoxia_6wks | 0.461 | 0.906 |
| glycerol | -0.462 | -1.024 |
| cholesterol | 0.315 | -0.541 |
| AJ | -0.602 | 0.133 |
| Bibs02 | -0.338 | -0.823 |
| Bibs02c | -0.591 | -0.259 |
| BL6 | 0.492 | 0.412 |
| BL6a | -0.188 | -0.329 |
| BXD01 | -0.746 | 0.328 |
| BXD010 | 0.46 | -0.303 |
| BXD011 | 0.138 | 0.524 |
| BXD03 | -0.26 | 0.227 |
| BXD04 | -0.093 | -0.065 |
| BXD05 | -0.446 | -0.489 |
| BXD06 | 0.23 | 0.191 |
| BXD07 | 0.017 | -0.01 |
| BXD08 | 0.914 | 0.173 |
| BXD09 | -0.332 | -0.454 |
| CAST | 0.148 | -0.267 |
| CCcont | -0.678 | 0.306 |
| DS01 | 0.66 | -0.352 |
| DS02 | 1.588 | -0.113 |
| DS04 | 0.294 | 0.901 |
| DS0c | 0.248 | -0.701 |
| GP01 | 1.042 | -0.737 |
| GP02 | 0.567 | 0.781 |
| GP0c | 0.439 | -0.099 |
| NOD | -0.617 | -0.553 |
| NZO | -0.611 | 0.348 |
| PWK | 0.307 | -0.325 |
| H37Rv_KO_CtpC | -0.187 | -0.06 |
| H37Rv_KO_CtpD | -1.179 | -1.044 |
| H37Rv_KO_Rv1272 | -0.467 | 0.156 |
| H37Rv_KO_SugABC | 0.581 | -0.682 |
| H37Rv_KO_MbtN | 1.214 | 0.661 |
| Trans05 | 0.069 | 0.396 |
| macrophage_unactivated | -0.903 | -0.152 |
| IL1 | 0.0 | -0.142 |
| Rapamycin | 0.525 | 0.641 |
| Tcell | -0.472 | -0.218 |
| GMCSF | 0.069 | 1.053 |
| IFNab | -0.027 | 0.0 |
| IFNg | -0.094 | 0.788 |
| IFNg_GMCSF1 | 0.0 | 0.201 |
| Rv1432_day32 | 1.754 | 0.422 |
| Rv1565c_day32 | 1.249 | 2.104 |
| secA2_input | 1.171 | 0.985 |
| delta_Rv3594 | -1.075 | -0.772 |
| delta_Rv3717 | -0.51 | -0.204 |
| delta_Rv3811 | 0.146 | -1.52 |
| delta_Rv0954 | -0.238 | 0.2 |
| PonA1 | 0.275 | 0.19 |
| EccD1_KO | 1.74 | 0.997 |
| EspI_KO | 1.246 | 1.135 |
| PE35_KO | 0.685 | 0.977 |
| PPE68_KO | 0.822 | 1.741 |
| glycerol2 | -0.279 | 0.216 |
| lignocerate | -0.068 | 0.934 |
| oleate | -0.196 | -0.102 |
| phosphatidylcholine | -0.16 | 0.577 |
| acetate | -0.15 | 0.239 |
| glucAc | -0.474 | 0.522 |
| Rv0950ko | -0.464 | -0.546 |
| Rv1096ko | -1.273 | 1.071 |
| Rv3684ko | -1.248 | -0.324 |
| delta_otsA_trehalose | -0.339 | -0.476 |