Top 10 genes with highest correlation to Rv1147/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2505c/fadD35 | (cc=0.5326) | info on Rv2505c/fadD35 |
| Rv2504c/scoA | (cc=0.4527) | info on Rv2504c/scoA |
| Rv1424c/- | (cc=0.4204) | info on Rv1424c/- |
| Rv2136c/- | (cc=0.417) | info on Rv2136c/- |
| Rv2820c/- | (cc=0.4123) | info on Rv2820c/- |
| Rv2295/- | (cc=0.4111) | info on Rv2295/- |
| Rv3730c/- | (cc=0.4053) | info on Rv3730c/- |
| Rv1215c/- | (cc=0.3918) | info on Rv1215c/- |
| Rv2424c/- | (cc=0.3876) | info on Rv2424c/- |
| Rv1768/PE_PGRS31 | (cc=0.3851) | info on Rv1768/PE_PGRS31 |
Correlation of Rv1147/- with Rv1768/PE_PGRS31
Normalized LFCs for Rv1147/-:
(description and provenance of datasets)
| Rv1147/- | Rv1768/PE_PGRS31 | |
| Fe_supp_jason_reseq | -0.039 | -0.218 |
| low_pH_jason_reseq | -0.368 | -1.062 |
| NO_jason_reseq | -0.131 | 0.223 |
| B6_jason_reseq | -0.353 | 0.591 |
| MHCII_jason_reseq | -0.281 | 0.572 |
| Isoniazid02 | 0.326 | 1.302 |
| Rifampicin4 | 0.536 | 0.0 |
| Ethambutol3 | 2.456 | 1.609 |
| Meropenem3 | -0.47 | -0.349 |
| Vancomycin16 | 0.478 | -0.475 |
| Rv2680_day32 | -0.257 | 0.0 |
| H37Rv_KO_MarP | 0.316 | 0.013 |
| hypoxia_3wks | 0.475 | 0.036 |
| hypoxia_6wks | 0.461 | -0.215 |
| glycerol | -0.462 | 1.712 |
| cholesterol | 0.315 | 1.935 |
| AJ | -0.602 | 0.551 |
| Bibs02 | -0.338 | 0.136 |
| Bibs02c | -0.591 | -0.155 |
| BL6 | 0.492 | 0.4 |
| BL6a | -0.188 | 0.023 |
| BXD01 | -0.746 | -0.2 |
| BXD010 | 0.46 | -0.385 |
| BXD011 | 0.138 | 1.1 |
| BXD03 | -0.26 | 0.016 |
| BXD04 | -0.093 | 0.495 |
| BXD05 | -0.446 | -0.263 |
| BXD06 | 0.23 | -0.488 |
| BXD07 | 0.017 | -0.271 |
| BXD08 | 0.914 | -0.098 |
| BXD09 | -0.332 | -0.379 |
| CAST | 0.148 | -0.098 |
| CCcont | -0.678 | -0.521 |
| DS01 | 0.66 | 0.376 |
| DS02 | 1.588 | 0.05 |
| DS04 | 0.294 | 0.807 |
| DS0c | 0.248 | 0.335 |
| GP01 | 1.042 | 1.061 |
| GP02 | 0.567 | 0.624 |
| GP0c | 0.439 | 1.092 |
| NOD | -0.617 | -0.054 |
| NZO | -0.611 | -0.212 |
| PWK | 0.307 | 0.08 |
| H37Rv_KO_CtpC | -0.187 | 0.61 |
| H37Rv_KO_CtpD | -1.179 | -0.266 |
| H37Rv_KO_Rv1272 | -0.467 | 1.042 |
| H37Rv_KO_SugABC | 0.581 | 0.679 |
| H37Rv_KO_MbtN | 1.214 | 0.143 |
| Trans05 | 0.069 | 0.496 |
| macrophage_unactivated | -0.903 | -0.12 |
| IL1 | 0.0 | -0.199 |
| Rapamycin | 0.525 | -0.617 |
| Tcell | -0.472 | -0.45 |
| GMCSF | 0.069 | 0.42 |
| IFNab | -0.027 | -0.203 |
| IFNg | -0.094 | -0.508 |
| IFNg_GMCSF1 | 0.0 | 0.173 |
| Rv1432_day32 | 1.754 | 0.911 |
| Rv1565c_day32 | 1.249 | -0.092 |
| secA2_input | 1.171 | 0.185 |
| delta_Rv3594 | -1.075 | 0.395 |
| delta_Rv3717 | -0.51 | -0.326 |
| delta_Rv3811 | 0.146 | 0.506 |
| delta_Rv0954 | -0.238 | -0.036 |
| PonA1 | 0.275 | 0.298 |
| EccD1_KO | 1.74 | 1.121 |
| EspI_KO | 1.246 | 0.029 |
| PE35_KO | 0.685 | 0.72 |
| PPE68_KO | 0.822 | 0.841 |
| glycerol2 | -0.279 | -0.628 |
| lignocerate | -0.068 | -0.636 |
| oleate | -0.196 | -0.679 |
| phosphatidylcholine | -0.16 | -0.436 |
| acetate | -0.15 | -0.796 |
| glucAc | -0.474 | -0.585 |
| Rv0950ko | -0.464 | -0.054 |
| Rv1096ko | -1.273 | -0.054 |
| Rv3684ko | -1.248 | -0.403 |
| delta_otsA_trehalose | -0.339 | 0.159 |