Top 10 genes with highest correlation to Rv1118c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1766/- | (cc=0.5994) | info on Rv1766/- |
| Rv1514c/- | (cc=0.5506) | info on Rv1514c/- |
| Rv1647/- | (cc=0.5479) | info on Rv1647/- |
| Rv1704c/cycA | (cc=0.5471) | info on Rv1704c/cycA |
| Rv1281c/oppD | (cc=0.5446) | info on Rv1281c/oppD |
| Rv1182/papA3 | (cc=0.5346) | info on Rv1182/papA3 |
| Rv2599/- | (cc=0.5298) | info on Rv2599/- |
| Rv1467c/fadE15 | (cc=0.514) | info on Rv1467c/fadE15 |
| Rv1180/pks3 | (cc=0.5109) | info on Rv1180/pks3 |
| Rv1563c/treY | (cc=0.5035) | info on Rv1563c/treY |
Correlation of Rv1118c/- with Rv1704c/cycA
Normalized LFCs for Rv1118c/-:
(description and provenance of datasets)
| Rv1118c/- | Rv1704c/cycA | |
| Fe_supp_jason_reseq | 0.474 | 0.592 |
| low_pH_jason_reseq | 0.0 | -0.597 |
| NO_jason_reseq | -0.131 | -0.176 |
| B6_jason_reseq | 0.31 | 0.185 |
| MHCII_jason_reseq | 1.137 | 0.454 |
| Isoniazid02 | -0.543 | 0.092 |
| Rifampicin4 | -0.631 | -0.219 |
| Ethambutol3 | -0.539 | -0.193 |
| Meropenem3 | -0.331 | 0.017 |
| Vancomycin16 | -0.517 | -0.058 |
| Rv2680_day32 | -0.3 | -1.102 |
| H37Rv_KO_MarP | -0.262 | 0.0 |
| hypoxia_3wks | -0.343 | -0.335 |
| hypoxia_6wks | 0.063 | 0.063 |
| glycerol | 0.417 | -0.168 |
| cholesterol | -0.152 | -0.557 |
| AJ | 0.124 | -0.108 |
| Bibs02 | 0.44 | -0.502 |
| Bibs02c | 0.218 | 0.032 |
| BL6 | 0.211 | -0.168 |
| BL6a | -0.013 | -0.188 |
| BXD01 | -0.859 | -0.559 |
| BXD010 | 0.199 | -0.393 |
| BXD011 | -0.714 | -0.436 |
| BXD03 | -0.743 | -0.825 |
| BXD04 | 0.039 | 0.19 |
| BXD05 | -0.45 | -0.682 |
| BXD06 | -0.719 | -0.314 |
| BXD07 | -0.457 | -0.615 |
| BXD08 | -0.909 | -0.111 |
| BXD09 | -0.339 | -0.349 |
| CAST | 0.022 | -0.349 |
| CCcont | -0.313 | -0.278 |
| DS01 | -0.031 | 0.238 |
| DS02 | -0.197 | -0.23 |
| DS04 | 0.461 | 0.365 |
| DS0c | 0.544 | 0.286 |
| GP01 | -0.271 | 0.143 |
| GP02 | -0.384 | 0.72 |
| GP0c | -0.073 | -0.481 |
| NOD | 0.885 | 2.455 |
| NZO | -0.53 | -0.061 |
| PWK | 0.169 | -0.04 |
| H37Rv_KO_CtpC | 0.242 | 0.193 |
| H37Rv_KO_CtpD | -0.188 | 0.336 |
| H37Rv_KO_Rv1272 | -0.133 | 0.0 |
| H37Rv_KO_SugABC | 0.25 | -1.253 |
| H37Rv_KO_MbtN | 0.519 | 0.398 |
| Trans05 | -0.347 | 0.558 |
| macrophage_unactivated | -0.827 | -0.385 |
| IL1 | -0.46 | -0.362 |
| Rapamycin | -0.153 | 0.095 |
| Tcell | -0.707 | -0.14 |
| GMCSF | 0.114 | 0.349 |
| IFNab | -0.396 | -1.17 |
| IFNg | 0.0 | 0.029 |
| IFNg_GMCSF1 | -0.603 | 0.258 |
| Rv1432_day32 | -0.18 | 0.451 |
| Rv1565c_day32 | 0.18 | -0.158 |
| secA2_input | 0.394 | -0.501 |
| delta_Rv3594 | 0.333 | 0.168 |
| delta_Rv3717 | -0.224 | 0.194 |
| delta_Rv3811 | 0.628 | 0.504 |
| delta_Rv0954 | -0.017 | 0.523 |
| PonA1 | 0.493 | 0.32 |
| EccD1_KO | 0.562 | 0.493 |
| EspI_KO | 1.349 | 0.944 |
| PE35_KO | 1.231 | 1.278 |
| PPE68_KO | 0.627 | 1.129 |
| glycerol2 | 0.3 | 0.041 |
| lignocerate | 0.57 | 0.623 |
| oleate | -0.53 | -0.535 |
| phosphatidylcholine | 0.197 | 0.384 |
| acetate | -0.055 | 0.231 |
| glucAc | 0.161 | 0.934 |
| Rv0950ko | -0.066 | 0.712 |
| Rv1096ko | 0.081 | 0.28 |
| Rv3684ko | -0.242 | -0.468 |
| delta_otsA_trehalose | 1.128 | 0.244 |