Top 10 genes with highest correlation to Rv1117/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2396/PE_PGRS41 | (cc=0.5174) | info on Rv2396/PE_PGRS41 |
| Rv1646/PE17 | (cc=0.5113) | info on Rv1646/PE17 |
| Rv3065/mmr | (cc=0.5073) | info on Rv3065/mmr |
| Rv3184/- | (cc=0.4719) | info on Rv3184/- |
| Rv3884c/eccA2 | (cc=0.4637) | info on Rv3884c/eccA2 |
| Rv0830/- | (cc=0.4427) | info on Rv0830/- |
| Rv2950c/fadD29 | (cc=0.4345) | info on Rv2950c/fadD29 |
| Rv2639c/- | (cc=0.4339) | info on Rv2639c/- |
| Rv2957/- | (cc=0.4316) | info on Rv2957/- |
| Rv3749c/- | (cc=0.4311) | info on Rv3749c/- |
Correlation of Rv1117/- with Rv3749c/-
Normalized LFCs for Rv1117/-:
(description and provenance of datasets)
| Rv1117/- | Rv3749c/- | |
| Fe_supp_jason_reseq | 0.325 | 0.253 |
| low_pH_jason_reseq | 0.652 | -0.602 |
| NO_jason_reseq | 1.302 | 0.026 |
| B6_jason_reseq | 0.628 | 0.466 |
| MHCII_jason_reseq | 0.89 | 0.688 |
| Isoniazid02 | -1.129 | -0.227 |
| Rifampicin4 | 0.249 | 0.062 |
| Ethambutol3 | -0.731 | 0.136 |
| Meropenem3 | -0.321 | -0.904 |
| Vancomycin16 | -0.215 | -0.464 |
| Rv2680_day32 | 0.432 | -0.008 |
| H37Rv_KO_MarP | -0.058 | 0.429 |
| hypoxia_3wks | -0.766 | -0.1 |
| hypoxia_6wks | -2.107 | -0.098 |
| glycerol | -0.05 | -2.336 |
| cholesterol | -0.147 | -1.456 |
| AJ | 1.449 | 0.225 |
| Bibs02 | 0.948 | -0.535 |
| Bibs02c | 1.676 | 0.779 |
| BL6 | -0.049 | -0.411 |
| BL6a | 0.967 | 0.532 |
| BXD01 | 0.889 | -0.171 |
| BXD010 | 0.198 | 0.558 |
| BXD011 | -0.323 | -0.294 |
| BXD03 | 0.727 | -0.054 |
| BXD04 | 0.692 | -0.348 |
| BXD05 | 0.086 | 0.359 |
| BXD06 | 0.574 | -0.489 |
| BXD07 | 0.525 | -0.021 |
| BXD08 | 0.248 | -0.206 |
| BXD09 | 0.195 | -0.101 |
| CAST | 0.906 | 0.354 |
| CCcont | 0.411 | -0.373 |
| DS01 | 0.385 | -0.101 |
| DS02 | 0.11 | -0.487 |
| DS04 | 0.429 | -0.521 |
| DS0c | -0.099 | 0.193 |
| GP01 | 0.369 | 1.065 |
| GP02 | 2.489 | -0.271 |
| GP0c | 0.316 | -0.257 |
| NOD | 0.251 | 0.716 |
| NZO | 1.211 | 0.077 |
| PWK | 0.566 | 0.175 |
| H37Rv_KO_CtpC | 0.98 | -0.755 |
| H37Rv_KO_CtpD | -0.532 | -0.643 |
| H37Rv_KO_Rv1272 | 1.288 | -0.229 |
| H37Rv_KO_SugABC | 1.45 | -0.009 |
| H37Rv_KO_MbtN | 0.819 | -1.433 |
| Trans05 | 0.339 | -0.542 |
| macrophage_unactivated | 0.095 | -1.386 |
| IL1 | -1.818 | -5.09 |
| Rapamycin | -1.292 | -4.944 |
| Tcell | 0.306 | 2.366 |
| GMCSF | -1.31 | -4.267 |
| IFNab | 0.163 | -4.734 |
| IFNg | -1.686 | -4.479 |
| IFNg_GMCSF1 | -1.1 | -5.144 |
| Rv1432_day32 | -0.369 | 0.077 |
| Rv1565c_day32 | 0.12 | 0.18 |
| secA2_input | 2.365 | -0.941 |
| delta_Rv3594 | 0.587 | -0.393 |
| delta_Rv3717 | 0.544 | -0.339 |
| delta_Rv3811 | 0.132 | -0.082 |
| delta_Rv0954 | 0.464 | 0.141 |
| PonA1 | 0.542 | -0.029 |
| EccD1_KO | 0.96 | -0.428 |
| EspI_KO | 1.694 | -0.034 |
| PE35_KO | 1.89 | -0.604 |
| PPE68_KO | 1.878 | -0.877 |
| glycerol2 | 1.418 | 0.901 |
| lignocerate | 0.784 | 0.793 |
| oleate | 1.448 | 0.906 |
| phosphatidylcholine | 0.98 | 1.018 |
| acetate | 0.741 | 0.318 |
| glucAc | 0.748 | 0.22 |
| Rv0950ko | -0.425 | 0.356 |
| Rv1096ko | -0.495 | 0.425 |
| Rv3684ko | -0.57 | -0.016 |
| delta_otsA_trehalose | -1.122 | 1.092 |