Top 10 genes with highest correlation to Rv1085c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3230c/- | (cc=0.5478) | info on Rv3230c/- |
| Rv2081c/- | (cc=0.5172) | info on Rv2081c/- |
| Rv0346c/ansP2 | (cc=0.4684) | info on Rv0346c/ansP2 |
| Rv1538c/ansA | (cc=0.4579) | info on Rv1538c/ansA |
| Rv1129c/- | (cc=0.4292) | info on Rv1129c/- |
| Rv0396/- | (cc=0.4046) | info on Rv0396/- |
| Rv3135/PPE50 | (cc=0.3991) | info on Rv3135/PPE50 |
| Rv3229c/desA3 | (cc=0.3871) | info on Rv3229c/desA3 |
| Rv0914c/- | (cc=0.3809) | info on Rv0914c/- |
| Rv0837c/- | (cc=0.3752) | info on Rv0837c/- |
Correlation of Rv1085c/- with Rv3229c/desA3
Normalized LFCs for Rv1085c/-:
(description and provenance of datasets)
| Rv1085c/- | Rv3229c/desA3 | |
| Fe_supp_jason_reseq | 0.923 | 1.318 |
| low_pH_jason_reseq | -1.563 | -1.283 |
| NO_jason_reseq | -0.761 | -0.242 |
| B6_jason_reseq | -0.601 | 0.017 |
| MHCII_jason_reseq | 0.491 | 0.538 |
| Isoniazid02 | -0.941 | -0.215 |
| Rifampicin4 | -0.249 | -0.523 |
| Ethambutol3 | -0.626 | -0.473 |
| Meropenem3 | 2.199 | -0.851 |
| Vancomycin16 | 0.443 | 0.769 |
| Rv2680_day32 | -0.584 | -1.084 |
| H37Rv_KO_MarP | -0.148 | -1.983 |
| hypoxia_3wks | 0.303 | 1.304 |
| hypoxia_6wks | -0.382 | -0.56 |
| glycerol | -6.0 | -3.397 |
| cholesterol | -4.689 | -3.361 |
| AJ | -0.435 | -0.666 |
| Bibs02 | -1.98 | -2.394 |
| Bibs02c | -0.606 | -1.035 |
| BL6 | -0.777 | 0.817 |
| BL6a | -1.161 | -1.118 |
| BXD01 | -1.461 | -0.426 |
| BXD010 | -0.621 | -0.505 |
| BXD011 | -0.975 | 0.9 |
| BXD03 | -0.478 | -0.605 |
| BXD04 | -1.657 | -0.498 |
| BXD05 | -1.002 | 0.296 |
| BXD06 | -1.05 | -0.352 |
| BXD07 | -0.802 | -0.292 |
| BXD08 | -1.307 | -0.608 |
| BXD09 | -1.057 | -0.169 |
| CAST | -0.667 | -0.734 |
| CCcont | 0.05 | -0.159 |
| DS01 | -0.974 | -1.963 |
| DS02 | -0.896 | -1.987 |
| DS04 | -0.659 | -1.036 |
| DS0c | 0.618 | -1.433 |
| GP01 | -2.937 | 0.61 |
| GP02 | -2.827 | -0.504 |
| GP0c | -3.004 | -0.209 |
| NOD | -0.949 | 0.026 |
| NZO | -1.169 | -1.026 |
| PWK | -0.158 | -0.689 |
| H37Rv_KO_CtpC | -0.462 | -0.698 |
| H37Rv_KO_CtpD | -2.131 | 0.819 |
| H37Rv_KO_Rv1272 | 0.296 | 0.254 |
| H37Rv_KO_SugABC | -1.28 | 1.068 |
| H37Rv_KO_MbtN | -0.206 | -0.076 |
| Trans05 | 0.658 | -1.121 |
| macrophage_unactivated | 0.578 | 1.736 |
| IL1 | -0.478 | -0.35 |
| Rapamycin | -1.12 | -1.317 |
| Tcell | -1.049 | -1.975 |
| GMCSF | -0.425 | 0.718 |
| IFNab | -0.348 | -0.29 |
| IFNg | 0.021 | 1.433 |
| IFNg_GMCSF1 | 0.207 | 0.097 |
| Rv1432_day32 | 1.215 | 0.554 |
| Rv1565c_day32 | -1.84 | -0.242 |
| secA2_input | -0.557 | -0.072 |
| delta_Rv3594 | 0.592 | 0.249 |
| delta_Rv3717 | 0.068 | 0.273 |
| delta_Rv3811 | 1.094 | 0.485 |
| delta_Rv0954 | 0.252 | 1.062 |
| PonA1 | 0.743 | 0.0 |
| EccD1_KO | -0.079 | -1.256 |
| EspI_KO | -0.727 | -1.417 |
| PE35_KO | -0.662 | -2.272 |
| PPE68_KO | -0.138 | -1.155 |
| glycerol2 | -4.384 | 0.643 |
| lignocerate | -2.593 | 0.662 |
| oleate | 0.784 | 0.241 |
| phosphatidylcholine | 0.478 | 0.929 |
| acetate | 0.707 | 0.763 |
| glucAc | 0.718 | 1.236 |
| Rv0950ko | 0.772 | -0.464 |
| Rv1096ko | 1.276 | 0.087 |
| Rv3684ko | 1.782 | 0.075 |
| delta_otsA_trehalose | -1.098 | 0.591 |