Top 10 genes with highest correlation to Rv1085c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3230c/- | (cc=0.5478) | info on Rv3230c/- |
| Rv2081c/- | (cc=0.5172) | info on Rv2081c/- |
| Rv0346c/ansP2 | (cc=0.4684) | info on Rv0346c/ansP2 |
| Rv1538c/ansA | (cc=0.4579) | info on Rv1538c/ansA |
| Rv1129c/- | (cc=0.4292) | info on Rv1129c/- |
| Rv0396/- | (cc=0.4046) | info on Rv0396/- |
| Rv3135/PPE50 | (cc=0.3991) | info on Rv3135/PPE50 |
| Rv3229c/desA3 | (cc=0.3871) | info on Rv3229c/desA3 |
| Rv0914c/- | (cc=0.3809) | info on Rv0914c/- |
| Rv0837c/- | (cc=0.3752) | info on Rv0837c/- |
Correlation of Rv1085c/- with Rv1538c/ansA
Normalized LFCs for Rv1085c/-:
(description and provenance of datasets)
| Rv1085c/- | Rv1538c/ansA | |
| Fe_supp_jason_reseq | 0.923 | -0.957 |
| low_pH_jason_reseq | -1.563 | -1.168 |
| NO_jason_reseq | -0.761 | 0.032 |
| B6_jason_reseq | -0.601 | -3.362 |
| MHCII_jason_reseq | 0.491 | -2.132 |
| Isoniazid02 | -0.941 | -1.713 |
| Rifampicin4 | -0.249 | -0.376 |
| Ethambutol3 | -0.626 | 1.36 |
| Meropenem3 | 2.199 | -0.527 |
| Vancomycin16 | 0.443 | -1.048 |
| Rv2680_day32 | -0.584 | -2.826 |
| H37Rv_KO_MarP | -0.148 | 0.563 |
| hypoxia_3wks | 0.303 | -2.265 |
| hypoxia_6wks | -0.382 | -3.168 |
| glycerol | -6.0 | -6.0 |
| cholesterol | -4.689 | -4.849 |
| AJ | -0.435 | -1.249 |
| Bibs02 | -1.98 | -0.629 |
| Bibs02c | -0.606 | -2.035 |
| BL6 | -0.777 | -2.408 |
| BL6a | -1.161 | -2.175 |
| BXD01 | -1.461 | -2.777 |
| BXD010 | -0.621 | -1.114 |
| BXD011 | -0.975 | -1.772 |
| BXD03 | -0.478 | -1.642 |
| BXD04 | -1.657 | -1.484 |
| BXD05 | -1.002 | -2.133 |
| BXD06 | -1.05 | -2.195 |
| BXD07 | -0.802 | -2.365 |
| BXD08 | -1.307 | -1.893 |
| BXD09 | -1.057 | -2.024 |
| CAST | -0.667 | -1.445 |
| CCcont | 0.05 | -0.741 |
| DS01 | -0.974 | -2.324 |
| DS02 | -0.896 | -1.314 |
| DS04 | -0.659 | -3.49 |
| DS0c | 0.618 | -2.305 |
| GP01 | -2.937 | -1.708 |
| GP02 | -2.827 | -2.324 |
| GP0c | -3.004 | -2.138 |
| NOD | -0.949 | -1.131 |
| NZO | -1.169 | -1.962 |
| PWK | -0.158 | -1.027 |
| H37Rv_KO_CtpC | -0.462 | -1.824 |
| H37Rv_KO_CtpD | -2.131 | -1.331 |
| H37Rv_KO_Rv1272 | 0.296 | -2.605 |
| H37Rv_KO_SugABC | -1.28 | -1.394 |
| H37Rv_KO_MbtN | -0.206 | -1.451 |
| Trans05 | 0.658 | -2.35 |
| macrophage_unactivated | 0.578 | -1.424 |
| IL1 | -0.478 | -1.444 |
| Rapamycin | -1.12 | -1.203 |
| Tcell | -1.049 | 0.593 |
| GMCSF | -0.425 | -1.885 |
| IFNab | -0.348 | -1.944 |
| IFNg | 0.021 | -1.831 |
| IFNg_GMCSF1 | 0.207 | -1.125 |
| Rv1432_day32 | 1.215 | -2.924 |
| Rv1565c_day32 | -1.84 | -2.281 |
| secA2_input | -0.557 | 1.058 |
| delta_Rv3594 | 0.592 | 0.389 |
| delta_Rv3717 | 0.068 | -0.283 |
| delta_Rv3811 | 1.094 | 0.4 |
| delta_Rv0954 | 0.252 | 1.304 |
| PonA1 | 0.743 | 0.906 |
| EccD1_KO | -0.079 | -0.76 |
| EspI_KO | -0.727 | -1.32 |
| PE35_KO | -0.662 | -0.12 |
| PPE68_KO | -0.138 | -0.371 |
| glycerol2 | -4.384 | 0.161 |
| lignocerate | -2.593 | -0.32 |
| oleate | 0.784 | -0.373 |
| phosphatidylcholine | 0.478 | -0.368 |
| acetate | 0.707 | -0.437 |
| glucAc | 0.718 | -0.272 |
| Rv0950ko | 0.772 | 0.374 |
| Rv1096ko | 1.276 | 0.757 |
| Rv3684ko | 1.782 | 0.619 |
| delta_otsA_trehalose | -1.098 | -0.694 |