Top 10 genes with highest correlation to Rv1085c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3230c/- | (cc=0.5478) | info on Rv3230c/- |
| Rv2081c/- | (cc=0.5172) | info on Rv2081c/- |
| Rv0346c/ansP2 | (cc=0.4684) | info on Rv0346c/ansP2 |
| Rv1538c/ansA | (cc=0.4579) | info on Rv1538c/ansA |
| Rv1129c/- | (cc=0.4292) | info on Rv1129c/- |
| Rv0396/- | (cc=0.4046) | info on Rv0396/- |
| Rv3135/PPE50 | (cc=0.3991) | info on Rv3135/PPE50 |
| Rv3229c/desA3 | (cc=0.3871) | info on Rv3229c/desA3 |
| Rv0914c/- | (cc=0.3809) | info on Rv0914c/- |
| Rv0837c/- | (cc=0.3752) | info on Rv0837c/- |
Correlation of Rv1085c/- with Rv3135/PPE50
Normalized LFCs for Rv1085c/-:
(description and provenance of datasets)
| Rv1085c/- | Rv3135/PPE50 | |
| Fe_supp_jason_reseq | 0.923 | 0.688 |
| low_pH_jason_reseq | -1.563 | 0.174 |
| NO_jason_reseq | -0.761 | 2.801 |
| B6_jason_reseq | -0.601 | 2.183 |
| MHCII_jason_reseq | 0.491 | 1.116 |
| Isoniazid02 | -0.941 | 3.336 |
| Rifampicin4 | -0.249 | -2.285 |
| Ethambutol3 | -0.626 | 1.802 |
| Meropenem3 | 2.199 | 3.717 |
| Vancomycin16 | 0.443 | -2.995 |
| Rv2680_day32 | -0.584 | 2.964 |
| H37Rv_KO_MarP | -0.148 | 1.094 |
| hypoxia_3wks | 0.303 | 0.562 |
| hypoxia_6wks | -0.382 | -1.061 |
| glycerol | -6.0 | -4.007 |
| cholesterol | -4.689 | -5.184 |
| AJ | -0.435 | -2.508 |
| Bibs02 | -1.98 | -1.37 |
| Bibs02c | -0.606 | -1.193 |
| BL6 | -0.777 | -3.041 |
| BL6a | -1.161 | -1.129 |
| BXD01 | -1.461 | -1.012 |
| BXD010 | -0.621 | -0.585 |
| BXD011 | -0.975 | -0.534 |
| BXD03 | -0.478 | -2.318 |
| BXD04 | -1.657 | 0.107 |
| BXD05 | -1.002 | -0.724 |
| BXD06 | -1.05 | -0.534 |
| BXD07 | -0.802 | -1.596 |
| BXD08 | -1.307 | -0.665 |
| BXD09 | -1.057 | -1.041 |
| CAST | -0.667 | -1.864 |
| CCcont | 0.05 | -1.868 |
| DS01 | -0.974 | -2.247 |
| DS02 | -0.896 | -0.487 |
| DS04 | -0.659 | -2.562 |
| DS0c | 0.618 | -1.138 |
| GP01 | -2.937 | -4.382 |
| GP02 | -2.827 | -3.217 |
| GP0c | -3.004 | -5.348 |
| NOD | -0.949 | -1.914 |
| NZO | -1.169 | -0.813 |
| PWK | -0.158 | -1.82 |
| H37Rv_KO_CtpC | -0.462 | -0.453 |
| H37Rv_KO_CtpD | -2.131 | 0.28 |
| H37Rv_KO_Rv1272 | 0.296 | -2.059 |
| H37Rv_KO_SugABC | -1.28 | -1.424 |
| H37Rv_KO_MbtN | -0.206 | -2.371 |
| Trans05 | 0.658 | -1.383 |
| macrophage_unactivated | 0.578 | -2.209 |
| IL1 | -0.478 | -0.715 |
| Rapamycin | -1.12 | -1.163 |
| Tcell | -1.049 | 1.137 |
| GMCSF | -0.425 | -0.853 |
| IFNab | -0.348 | -1.769 |
| IFNg | 0.021 | 0.623 |
| IFNg_GMCSF1 | 0.207 | -0.217 |
| Rv1432_day32 | 1.215 | 2.57 |
| Rv1565c_day32 | -1.84 | -2.088 |
| secA2_input | -0.557 | -1.736 |
| delta_Rv3594 | 0.592 | -1.065 |
| delta_Rv3717 | 0.068 | -1.501 |
| delta_Rv3811 | 1.094 | -1.205 |
| delta_Rv0954 | 0.252 | -1.047 |
| PonA1 | 0.743 | -1.091 |
| EccD1_KO | -0.079 | -2.937 |
| EspI_KO | -0.727 | -2.033 |
| PE35_KO | -0.662 | -1.61 |
| PPE68_KO | -0.138 | -1.465 |
| glycerol2 | -4.384 | 1.188 |
| lignocerate | -2.593 | -1.594 |
| oleate | 0.784 | 1.752 |
| phosphatidylcholine | 0.478 | 0.045 |
| acetate | 0.707 | -0.72 |
| glucAc | 0.718 | -1.299 |
| Rv0950ko | 0.772 | 0.024 |
| Rv1096ko | 1.276 | -1.342 |
| Rv3684ko | 1.782 | 0.671 |
| delta_otsA_trehalose | -1.098 | -2.409 |