Top 10 genes with highest correlation to Rv1085c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3230c/- | (cc=0.5478) | info on Rv3230c/- |
| Rv2081c/- | (cc=0.5172) | info on Rv2081c/- |
| Rv0346c/ansP2 | (cc=0.4684) | info on Rv0346c/ansP2 |
| Rv1538c/ansA | (cc=0.4579) | info on Rv1538c/ansA |
| Rv1129c/- | (cc=0.4292) | info on Rv1129c/- |
| Rv0396/- | (cc=0.4046) | info on Rv0396/- |
| Rv3135/PPE50 | (cc=0.3991) | info on Rv3135/PPE50 |
| Rv3229c/desA3 | (cc=0.3871) | info on Rv3229c/desA3 |
| Rv0914c/- | (cc=0.3809) | info on Rv0914c/- |
| Rv0837c/- | (cc=0.3752) | info on Rv0837c/- |
Correlation of Rv1085c/- with Rv0346c/ansP2
Normalized LFCs for Rv1085c/-:
(description and provenance of datasets)
| Rv1085c/- | Rv0346c/ansP2 | |
| Fe_supp_jason_reseq | 0.923 | -2.144 |
| low_pH_jason_reseq | -1.563 | -1.241 |
| NO_jason_reseq | -0.761 | -1.045 |
| B6_jason_reseq | -0.601 | -1.311 |
| MHCII_jason_reseq | 0.491 | -1.572 |
| Isoniazid02 | -0.941 | -1.132 |
| Rifampicin4 | -0.249 | 1.335 |
| Ethambutol3 | -0.626 | 1.181 |
| Meropenem3 | 2.199 | 0.052 |
| Vancomycin16 | 0.443 | -0.093 |
| Rv2680_day32 | -0.584 | 0.412 |
| H37Rv_KO_MarP | -0.148 | -0.648 |
| hypoxia_3wks | 0.303 | -0.614 |
| hypoxia_6wks | -0.382 | 1.662 |
| glycerol | -6.0 | -5.051 |
| cholesterol | -4.689 | -4.096 |
| AJ | -0.435 | -0.45 |
| Bibs02 | -1.98 | -0.146 |
| Bibs02c | -0.606 | -0.627 |
| BL6 | -0.777 | -0.755 |
| BL6a | -1.161 | -0.418 |
| BXD01 | -1.461 | -0.141 |
| BXD010 | -0.621 | 0.227 |
| BXD011 | -0.975 | 0.113 |
| BXD03 | -0.478 | 0.421 |
| BXD04 | -1.657 | 0.37 |
| BXD05 | -1.002 | 0.525 |
| BXD06 | -1.05 | 0.545 |
| BXD07 | -0.802 | 0.025 |
| BXD08 | -1.307 | -0.307 |
| BXD09 | -1.057 | -0.119 |
| CAST | -0.667 | 0.195 |
| CCcont | 0.05 | -0.805 |
| DS01 | -0.974 | -0.438 |
| DS02 | -0.896 | -0.939 |
| DS04 | -0.659 | 0.818 |
| DS0c | 0.618 | -0.677 |
| GP01 | -2.937 | -0.042 |
| GP02 | -2.827 | -0.829 |
| GP0c | -3.004 | -0.486 |
| NOD | -0.949 | -0.368 |
| NZO | -1.169 | -0.019 |
| PWK | -0.158 | 1.262 |
| H37Rv_KO_CtpC | -0.462 | -0.565 |
| H37Rv_KO_CtpD | -2.131 | -0.267 |
| H37Rv_KO_Rv1272 | 0.296 | -0.8 |
| H37Rv_KO_SugABC | -1.28 | -0.993 |
| H37Rv_KO_MbtN | -0.206 | 0.546 |
| Trans05 | 0.658 | -0.228 |
| macrophage_unactivated | 0.578 | -0.221 |
| IL1 | -0.478 | 0.095 |
| Rapamycin | -1.12 | -0.071 |
| Tcell | -1.049 | 0.951 |
| GMCSF | -0.425 | 0.639 |
| IFNab | -0.348 | -0.541 |
| IFNg | 0.021 | 0.337 |
| IFNg_GMCSF1 | 0.207 | 0.537 |
| Rv1432_day32 | 1.215 | 1.107 |
| Rv1565c_day32 | -1.84 | -1.156 |
| secA2_input | -0.557 | -0.54 |
| delta_Rv3594 | 0.592 | 0.809 |
| delta_Rv3717 | 0.068 | 0.938 |
| delta_Rv3811 | 1.094 | 0.828 |
| delta_Rv0954 | 0.252 | 0.061 |
| PonA1 | 0.743 | 0.381 |
| EccD1_KO | -0.079 | -0.187 |
| EspI_KO | -0.727 | -0.374 |
| PE35_KO | -0.662 | -1.059 |
| PPE68_KO | -0.138 | -0.723 |
| glycerol2 | -4.384 | 1.225 |
| lignocerate | -2.593 | -0.153 |
| oleate | 0.784 | 2.562 |
| phosphatidylcholine | 0.478 | 0.0 |
| acetate | 0.707 | 0.369 |
| glucAc | 0.718 | 0.685 |
| Rv0950ko | 0.772 | 0.353 |
| Rv1096ko | 1.276 | 0.437 |
| Rv3684ko | 1.782 | 0.242 |
| delta_otsA_trehalose | -1.098 | 0.449 |