Top 10 genes with highest correlation to Rv1079/metB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0123/- | (cc=0.5798) | info on Rv0123/- |
| Rv3755c/- | (cc=0.5299) | info on Rv3755c/- |
| Rv2366c/- | (cc=0.5203) | info on Rv2366c/- |
| Rv1422/- | (cc=0.5169) | info on Rv1422/- |
| Rv2894c/xerC | (cc=0.4972) | info on Rv2894c/xerC |
| Rv2978c/- | (cc=0.4711) | info on Rv2978c/- |
| Rv0545c/pitA | (cc=0.4606) | info on Rv0545c/pitA |
| Rv3715c/recR | (cc=0.4452) | info on Rv3715c/recR |
| Rv0903c/prrA | (cc=0.4362) | info on Rv0903c/prrA |
| Rv2231c/cobC | (cc=0.4275) | info on Rv2231c/cobC |
Correlation of Rv1079/metB with Rv3715c/recR
Normalized LFCs for Rv1079/metB:
(description and provenance of datasets)
| Rv1079/metB | Rv3715c/recR | |
| Fe_supp_jason_reseq | 0.647 | 2.883 |
| low_pH_jason_reseq | -0.433 | 0.0 |
| NO_jason_reseq | -1.733 | -1.993 |
| B6_jason_reseq | -0.523 | -0.413 |
| MHCII_jason_reseq | -1.319 | -0.283 |
| Isoniazid02 | 1.083 | 0.987 |
| Rifampicin4 | 0.466 | -0.357 |
| Ethambutol3 | 0.364 | 0.574 |
| Meropenem3 | 0.29 | 0.223 |
| Vancomycin16 | 0.377 | -0.976 |
| Rv2680_day32 | 0.109 | -0.642 |
| H37Rv_KO_MarP | 0.0 | -1.411 |
| hypoxia_3wks | 0.534 | -0.522 |
| hypoxia_6wks | -0.182 | -0.576 |
| glycerol | -0.932 | 1.537 |
| cholesterol | 0.614 | 0.463 |
| AJ | 0.044 | 0.324 |
| Bibs02 | -0.069 | 0.371 |
| Bibs02c | 0.039 | -0.527 |
| BL6 | 0.918 | 0.649 |
| BL6a | 0.432 | 0.0 |
| BXD01 | 0.343 | 0.79 |
| BXD010 | 0.136 | 0.722 |
| BXD011 | -0.233 | 0.0 |
| BXD03 | 0.639 | 1.448 |
| BXD04 | 0.787 | 0.395 |
| BXD05 | 0.773 | 0.502 |
| BXD06 | 0.208 | 0.566 |
| BXD07 | 0.621 | 1.445 |
| BXD08 | 0.0 | 1.351 |
| BXD09 | 0.664 | 0.285 |
| CAST | -0.871 | -0.809 |
| CCcont | 1.35 | 2.556 |
| DS01 | -0.044 | 0.171 |
| DS02 | -0.654 | -0.764 |
| DS04 | -1.012 | 0.394 |
| DS0c | 0.506 | 0.157 |
| GP01 | 0.122 | 1.484 |
| GP02 | -0.701 | 0.06 |
| GP0c | 0.303 | 0.893 |
| NOD | -0.042 | -0.566 |
| NZO | -0.551 | 1.124 |
| PWK | 0.142 | -0.494 |
| H37Rv_KO_CtpC | 1.146 | 2.019 |
| H37Rv_KO_CtpD | 1.041 | 0.537 |
| H37Rv_KO_Rv1272 | -0.611 | -0.495 |
| H37Rv_KO_SugABC | -0.755 | 1.605 |
| H37Rv_KO_MbtN | 1.662 | 0.487 |
| Trans05 | -0.393 | 0.344 |
| macrophage_unactivated | 0.426 | 0.669 |
| IL1 | -0.653 | -1.011 |
| Rapamycin | -0.147 | -0.491 |
| Tcell | -0.371 | 1.098 |
| GMCSF | -0.301 | -1.444 |
| IFNab | 0.698 | -0.236 |
| IFNg | 0.0 | -0.911 |
| IFNg_GMCSF1 | 0.286 | -0.779 |
| Rv1432_day32 | -0.43 | 0.0 |
| Rv1565c_day32 | -2.263 | -0.766 |
| secA2_input | 0.348 | 0.994 |
| delta_Rv3594 | 1.758 | 0.961 |
| delta_Rv3717 | 0.812 | 0.257 |
| delta_Rv3811 | 1.08 | 0.934 |
| delta_Rv0954 | 1.114 | 1.145 |
| PonA1 | 1.012 | 0.145 |
| EccD1_KO | -0.122 | -1.786 |
| EspI_KO | 0.0 | -2.772 |
| PE35_KO | 0.543 | -0.817 |
| PPE68_KO | 0.058 | -1.805 |
| glycerol2 | -0.343 | -2.434 |
| lignocerate | -1.108 | -2.02 |
| oleate | -0.583 | -1.961 |
| phosphatidylcholine | -1.615 | -2.027 |
| acetate | -1.277 | -0.166 |
| glucAc | -0.771 | 0.605 |
| Rv0950ko | 1.049 | -0.926 |
| Rv1096ko | 0.808 | 0.507 |
| Rv3684ko | 1.182 | 1.094 |
| delta_otsA_trehalose | 0.064 | 0.83 |