Top 10 genes with highest correlation to Rv1079/metB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0123/- | (cc=0.5798) | info on Rv0123/- |
| Rv3755c/- | (cc=0.5299) | info on Rv3755c/- |
| Rv2366c/- | (cc=0.5203) | info on Rv2366c/- |
| Rv1422/- | (cc=0.5169) | info on Rv1422/- |
| Rv2894c/xerC | (cc=0.4972) | info on Rv2894c/xerC |
| Rv2978c/- | (cc=0.4711) | info on Rv2978c/- |
| Rv0545c/pitA | (cc=0.4606) | info on Rv0545c/pitA |
| Rv3715c/recR | (cc=0.4452) | info on Rv3715c/recR |
| Rv0903c/prrA | (cc=0.4362) | info on Rv0903c/prrA |
| Rv2231c/cobC | (cc=0.4275) | info on Rv2231c/cobC |
Correlation of Rv1079/metB with Rv2231c/cobC
Normalized LFCs for Rv1079/metB:
(description and provenance of datasets)
| Rv1079/metB | Rv2231c/cobC | |
| Fe_supp_jason_reseq | 0.647 | -0.463 |
| low_pH_jason_reseq | -0.433 | -0.1 |
| NO_jason_reseq | -1.733 | -0.079 |
| B6_jason_reseq | -0.523 | -1.435 |
| MHCII_jason_reseq | -1.319 | -0.893 |
| Isoniazid02 | 1.083 | -0.581 |
| Rifampicin4 | 0.466 | 0.133 |
| Ethambutol3 | 0.364 | -0.158 |
| Meropenem3 | 0.29 | -0.363 |
| Vancomycin16 | 0.377 | -0.568 |
| Rv2680_day32 | 0.109 | 0.811 |
| H37Rv_KO_MarP | 0.0 | -1.507 |
| hypoxia_3wks | 0.534 | 0.467 |
| hypoxia_6wks | -0.182 | 1.205 |
| glycerol | -0.932 | 0.162 |
| cholesterol | 0.614 | -0.264 |
| AJ | 0.044 | -0.424 |
| Bibs02 | -0.069 | 0.946 |
| Bibs02c | 0.039 | -0.182 |
| BL6 | 0.918 | 0.477 |
| BL6a | 0.432 | 1.122 |
| BXD01 | 0.343 | 1.214 |
| BXD010 | 0.136 | 0.629 |
| BXD011 | -0.233 | 1.498 |
| BXD03 | 0.639 | 1.088 |
| BXD04 | 0.787 | 2.739 |
| BXD05 | 0.773 | 1.863 |
| BXD06 | 0.208 | 1.947 |
| BXD07 | 0.621 | 1.383 |
| BXD08 | 0.0 | 2.292 |
| BXD09 | 0.664 | 1.614 |
| CAST | -0.871 | -0.791 |
| CCcont | 1.35 | 1.202 |
| DS01 | -0.044 | 0.0 |
| DS02 | -0.654 | -0.189 |
| DS04 | -1.012 | -0.453 |
| DS0c | 0.506 | 1.383 |
| GP01 | 0.122 | 0.0 |
| GP02 | -0.701 | -0.286 |
| GP0c | 0.303 | -0.113 |
| NOD | -0.042 | -0.905 |
| NZO | -0.551 | 1.225 |
| PWK | 0.142 | -0.171 |
| H37Rv_KO_CtpC | 1.146 | 0.571 |
| H37Rv_KO_CtpD | 1.041 | -0.591 |
| H37Rv_KO_Rv1272 | -0.611 | 1.338 |
| H37Rv_KO_SugABC | -0.755 | 0.586 |
| H37Rv_KO_MbtN | 1.662 | 1.226 |
| Trans05 | -0.393 | 1.536 |
| macrophage_unactivated | 0.426 | 1.922 |
| IL1 | -0.653 | 1.139 |
| Rapamycin | -0.147 | 1.669 |
| Tcell | -0.371 | 1.189 |
| GMCSF | -0.301 | 1.014 |
| IFNab | 0.698 | 0.683 |
| IFNg | 0.0 | 0.82 |
| IFNg_GMCSF1 | 0.286 | 1.546 |
| Rv1432_day32 | -0.43 | -0.618 |
| Rv1565c_day32 | -2.263 | -1.989 |
| secA2_input | 0.348 | -0.62 |
| delta_Rv3594 | 1.758 | 2.709 |
| delta_Rv3717 | 0.812 | 2.718 |
| delta_Rv3811 | 1.08 | 2.314 |
| delta_Rv0954 | 1.114 | 1.773 |
| PonA1 | 1.012 | 1.506 |
| EccD1_KO | -0.122 | 0.201 |
| EspI_KO | 0.0 | -0.787 |
| PE35_KO | 0.543 | 0.265 |
| PPE68_KO | 0.058 | 0.099 |
| glycerol2 | -0.343 | 0.0 |
| lignocerate | -1.108 | 0.082 |
| oleate | -0.583 | 0.539 |
| phosphatidylcholine | -1.615 | 0.213 |
| acetate | -1.277 | -0.283 |
| glucAc | -0.771 | -0.405 |
| Rv0950ko | 1.049 | 0.395 |
| Rv1096ko | 0.808 | 0.202 |
| Rv3684ko | 1.182 | 0.0 |
| delta_otsA_trehalose | 0.064 | 0.58 |