Top 10 genes with highest correlation to Rv1071c/echA9:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1070c/echA8 | (cc=0.6892) | info on Rv1070c/echA8 |
| Rv1069c/- | (cc=0.6198) | info on Rv1069c/- |
| Rv3056/dinP | (cc=0.5701) | info on Rv3056/dinP |
| Rv1657/argR | (cc=0.562) | info on Rv1657/argR |
| Rv1135c/PPE16 | (cc=0.5444) | info on Rv1135c/PPE16 |
| Rv3482c/- | (cc=0.5373) | info on Rv3482c/- |
| Rv2142c/parE2 | (cc=0.5367) | info on Rv2142c/parE2 |
| Rv1074c/fadA3 | (cc=0.5258) | info on Rv1074c/fadA3 |
| Rv1192/- | (cc=0.5101) | info on Rv1192/- |
| Rv3190A/- | (cc=0.5051) | info on Rv3190A/- |
Correlation of Rv1071c/echA9 with Rv3190A/-
Normalized LFCs for Rv1071c/echA9:
(description and provenance of datasets)
| Rv1071c/echA9 | Rv3190A/- | |
| Fe_supp_jason_reseq | -2.134 | -0.586 |
| low_pH_jason_reseq | -6.0 | -2.028 |
| NO_jason_reseq | -0.714 | 0.625 |
| B6_jason_reseq | -1.643 | -1.103 |
| MHCII_jason_reseq | -0.403 | -0.835 |
| Isoniazid02 | -0.38 | 0.578 |
| Rifampicin4 | 1.625 | -0.352 |
| Ethambutol3 | 2.909 | 1.811 |
| Meropenem3 | -0.565 | 1.127 |
| Vancomycin16 | 0.65 | 0.427 |
| Rv2680_day32 | -1.463 | -0.28 |
| H37Rv_KO_MarP | 0.131 | 0.119 |
| hypoxia_3wks | -2.245 | -0.271 |
| hypoxia_6wks | -1.779 | 0.305 |
| glycerol | -0.341 | 0.039 |
| cholesterol | -1.471 | -1.12 |
| AJ | -1.143 | 0.734 |
| Bibs02 | -0.359 | -0.029 |
| Bibs02c | -0.361 | -0.076 |
| BL6 | -0.587 | 0.34 |
| BL6a | -1.323 | 0.616 |
| BXD01 | -1.426 | 0.217 |
| BXD010 | -1.162 | 1.089 |
| BXD011 | -1.515 | 0.536 |
| BXD03 | -0.581 | -0.281 |
| BXD04 | -0.728 | -0.245 |
| BXD05 | -1.541 | 0.188 |
| BXD06 | -1.418 | 0.139 |
| BXD07 | -1.218 | 0.074 |
| BXD08 | -1.412 | 0.539 |
| BXD09 | -1.427 | 0.855 |
| CAST | -0.267 | 0.674 |
| CCcont | -0.661 | 0.667 |
| DS01 | 0.95 | -0.144 |
| DS02 | 1.531 | 0.551 |
| DS04 | 0.034 | -1.189 |
| DS0c | 0.484 | 0.181 |
| GP01 | -1.89 | 0.519 |
| GP02 | -2.563 | -0.768 |
| GP0c | -2.376 | 0.247 |
| NOD | -0.093 | 1.601 |
| NZO | -0.936 | -0.088 |
| PWK | -0.365 | 0.352 |
| H37Rv_KO_CtpC | 0.685 | 1.212 |
| H37Rv_KO_CtpD | -1.157 | 0.503 |
| H37Rv_KO_Rv1272 | -1.269 | 0.0 |
| H37Rv_KO_SugABC | -0.94 | 0.26 |
| H37Rv_KO_MbtN | -1.364 | 0.07 |
| Trans05 | -1.065 | -0.685 |
| macrophage_unactivated | -1.231 | 0.335 |
| IL1 | -1.658 | 0.593 |
| Rapamycin | -1.547 | -0.35 |
| Tcell | -0.674 | -0.042 |
| GMCSF | -0.771 | 0.438 |
| IFNab | -1.69 | -0.995 |
| IFNg | -2.996 | 0.171 |
| IFNg_GMCSF1 | -2.718 | -0.779 |
| Rv1432_day32 | -1.287 | -0.05 |
| Rv1565c_day32 | -0.403 | -0.477 |
| secA2_input | 0.167 | -0.833 |
| delta_Rv3594 | 0.653 | 0.679 |
| delta_Rv3717 | -0.289 | 0.949 |
| delta_Rv3811 | 0.296 | 0.943 |
| delta_Rv0954 | 0.845 | 0.136 |
| PonA1 | 0.205 | 0.201 |
| EccD1_KO | 0.398 | 1.02 |
| EspI_KO | 0.73 | 0.884 |
| PE35_KO | 0.181 | 1.663 |
| PPE68_KO | -0.138 | 1.709 |
| glycerol2 | 0.738 | 1.087 |
| lignocerate | 0.588 | 1.478 |
| oleate | 1.09 | 0.194 |
| phosphatidylcholine | 0.714 | 1.106 |
| acetate | 0.032 | 1.122 |
| glucAc | -0.28 | 1.216 |
| Rv0950ko | -0.449 | 1.282 |
| Rv1096ko | 0.582 | 0.498 |
| Rv3684ko | -0.829 | -0.111 |
| delta_otsA_trehalose | -0.355 | 1.294 |