Top 10 genes with highest correlation to Rv1071c/echA9:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1070c/echA8 | (cc=0.6892) | info on Rv1070c/echA8 |
| Rv1069c/- | (cc=0.6198) | info on Rv1069c/- |
| Rv3056/dinP | (cc=0.5701) | info on Rv3056/dinP |
| Rv1657/argR | (cc=0.562) | info on Rv1657/argR |
| Rv1135c/PPE16 | (cc=0.5444) | info on Rv1135c/PPE16 |
| Rv3482c/- | (cc=0.5373) | info on Rv3482c/- |
| Rv2142c/parE2 | (cc=0.5367) | info on Rv2142c/parE2 |
| Rv1074c/fadA3 | (cc=0.5258) | info on Rv1074c/fadA3 |
| Rv1192/- | (cc=0.5101) | info on Rv1192/- |
| Rv3190A/- | (cc=0.5051) | info on Rv3190A/- |
Correlation of Rv1071c/echA9 with Rv1192/-
Normalized LFCs for Rv1071c/echA9:
(description and provenance of datasets)
| Rv1071c/echA9 | Rv1192/- | |
| Fe_supp_jason_reseq | -2.134 | 1.031 |
| low_pH_jason_reseq | -6.0 | -1.225 |
| NO_jason_reseq | -0.714 | -0.189 |
| B6_jason_reseq | -1.643 | 1.83 |
| MHCII_jason_reseq | -0.403 | 1.815 |
| Isoniazid02 | -0.38 | 0.377 |
| Rifampicin4 | 1.625 | -0.125 |
| Ethambutol3 | 2.909 | 1.46 |
| Meropenem3 | -0.565 | 1.205 |
| Vancomycin16 | 0.65 | 0.119 |
| Rv2680_day32 | -1.463 | 1.037 |
| H37Rv_KO_MarP | 0.131 | 0.203 |
| hypoxia_3wks | -2.245 | -0.861 |
| hypoxia_6wks | -1.779 | -1.207 |
| glycerol | -0.341 | -1.119 |
| cholesterol | -1.471 | -0.023 |
| AJ | -1.143 | 0.266 |
| Bibs02 | -0.359 | 0.485 |
| Bibs02c | -0.361 | 0.377 |
| BL6 | -0.587 | -0.701 |
| BL6a | -1.323 | -0.218 |
| BXD01 | -1.426 | -0.434 |
| BXD010 | -1.162 | -1.013 |
| BXD011 | -1.515 | -0.527 |
| BXD03 | -0.581 | -0.481 |
| BXD04 | -0.728 | -0.115 |
| BXD05 | -1.541 | -1.431 |
| BXD06 | -1.418 | -0.467 |
| BXD07 | -1.218 | -0.623 |
| BXD08 | -1.412 | -0.793 |
| BXD09 | -1.427 | -0.899 |
| CAST | -0.267 | 0.469 |
| CCcont | -0.661 | -0.592 |
| DS01 | 0.95 | 1.167 |
| DS02 | 1.531 | 0.429 |
| DS04 | 0.034 | 1.526 |
| DS0c | 0.484 | 0.947 |
| GP01 | -1.89 | -0.602 |
| GP02 | -2.563 | 0.033 |
| GP0c | -2.376 | -1.353 |
| NOD | -0.093 | 0.731 |
| NZO | -0.936 | 0.025 |
| PWK | -0.365 | 0.374 |
| H37Rv_KO_CtpC | 0.685 | -0.644 |
| H37Rv_KO_CtpD | -1.157 | -0.502 |
| H37Rv_KO_Rv1272 | -1.269 | -0.653 |
| H37Rv_KO_SugABC | -0.94 | -0.293 |
| H37Rv_KO_MbtN | -1.364 | -1.325 |
| Trans05 | -1.065 | -0.495 |
| macrophage_unactivated | -1.231 | 0.092 |
| IL1 | -1.658 | -0.329 |
| Rapamycin | -1.547 | -1.04 |
| Tcell | -0.674 | 0.248 |
| GMCSF | -0.771 | -0.465 |
| IFNab | -1.69 | -0.305 |
| IFNg | -2.996 | -0.81 |
| IFNg_GMCSF1 | -2.718 | -0.418 |
| Rv1432_day32 | -1.287 | -0.92 |
| Rv1565c_day32 | -0.403 | -0.573 |
| secA2_input | 0.167 | -0.177 |
| delta_Rv3594 | 0.653 | 0.659 |
| delta_Rv3717 | -0.289 | 0.02 |
| delta_Rv3811 | 0.296 | 0.946 |
| delta_Rv0954 | 0.845 | 1.187 |
| PonA1 | 0.205 | 0.372 |
| EccD1_KO | 0.398 | -0.957 |
| EspI_KO | 0.73 | -0.2 |
| PE35_KO | 0.181 | -0.277 |
| PPE68_KO | -0.138 | -0.035 |
| glycerol2 | 0.738 | 0.935 |
| lignocerate | 0.588 | 1.103 |
| oleate | 1.09 | 0.669 |
| phosphatidylcholine | 0.714 | 1.139 |
| acetate | 0.032 | 0.618 |
| glucAc | -0.28 | 0.666 |
| Rv0950ko | -0.449 | 0.648 |
| Rv1096ko | 0.582 | 0.682 |
| Rv3684ko | -0.829 | 0.383 |
| delta_otsA_trehalose | -0.355 | -0.476 |